Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04587 ATGGCATCTTCTACAGCCAAAACGAAGGTGTTTGATTCAGAAGAAGCTTTAGCAACGGTTAATATTCTGAGAGAAGCGTTTGTTTCTGGTAAGACTCGAAGCTACGAATGGAGAGTTTCTCAGTTGAAAGCTCTTTTGGAATTAACTGAAAAGCATGAGCAAGAGATTTTCGATGCTCTTTTCTCTGACTTAGCCAAATCTGAAGCTGAAGCCTTCATCCAAGAGATTGCTATGTTGAAAAACTCATCTAAAACTGCAATCAAGGAATTGAAGCGGTGGATGGCTCCGGAAAAGGTCCCAACATCCCTCACTACATTTCCTGCTTCAGCTGAAATAGTATCTGAACCACTTGGAGTTGTGTTGGTCATCTCTGCATGGAACTATCCATTTTTACTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTCTTAAAACCATCAGAAATTGCTCCAGCCACATCAGCATTGCTAGCAAAACTGGTAGGGGAGTACATGGATAACTCATCTATACGAGTTGTTGAGGGAGCAGTTGATGAAACATCAGCATTACTGCAACAAAAGTGGGATAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATTGTGATGGCGGCTGCTGCTAAGCACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCCCCTGTTGTTGTTGATTCAAAGTCAAATATCAACTTACAGGTTACAACTAGAAGGATAATTGCTGGAAAATGGGGTTGCAACAACGGACAGGCTTGCATTTCTCCTGATTATATTATAACCACAAAAGACTATGCTCCTAAGTTGGTGGATGCTCTAAAGACTGAATTGGAAAGTTTTTACGGAAAGAATCCTTTGGAATCAAAAGATTTGTCACGTATTGTAAACTCGAACCACTTTGCTCGTCTGACTAAGCTTTTGGATGATGATAAAGTTTCTGGTAAGATTGTTCATGGAGGTGAAAAGGATGAAACCAAATTGAGAATTAGCCCTACTCTTCTATTAGACGTTCCGCGAGATTCTCTAATAATGAGTGAAGAGATATTTGGTCCTTTACTTCCCATCGTCACAGTGGATAAAATAGAAGAAAGCTTTGATGTGATAAACTCAGGACCAAAGCCTCTTGCTGCATATATATTTACCAACAATAAGAATCTCAAGGAGAAGTTTGTTAAGACGATTTCTGCTGGTGGTTTGGTCATCAACGACACTACTATACACCTTGCGGTTCATACTCTACCTTTTGGAGGAGTAGGTGATAGTGGAGTTGGTGCATACCATGGAAAATTCTCGTTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTCGGTGATGCTTCTATAAGGTATCCACCATACACCAAAACAAAGTATAGATTGATGAAGGCTCTCATGACTGGCAGCATAATTGGTATAATTCGTGCTATATTTGGAAAGTCCTAG 1473 0.4033 MASSTAKTKVFDSEEALATVNILREAFVSGKTRSYEWRVSQLKALLELTEKHEQEIFDALFSDLAKSEAEAFIQEIAMLKNSSKTAIKELKRWMAPEKVPTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSALLAKLVGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKSNINLQVTTRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELESFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVHGGEKDETKLRISPTLLLDVPRDSLIMSEEIFGPLLPIVTVDKIEESFDVINSGPKPLAAYIFTNNKNLKEKFVKTISAGGLVINDTTIHLAVHTLPFGGVGDSGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTKTKYRLMKALMTGSIIGIIRAIFGKS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04587 490 FunFam Aldehyde dehydrogenase 225 427 - -
Vivi4g04587 490 Pfam Aldehyde dehydrogenase family 6 447 IPR015590 GO:0016491
Vivi4g04587 490 PIRSF ALDH 3 486 IPR012394 GO:0006081
Vivi4g04587 490 FunFam Aldehyde dehydrogenase 24 228 - -
Vivi4g04587 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 445 IPR016162 GO:0016491
Vivi4g04587 490 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Vivi4g04587 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 427 IPR016163 GO:0016620
Vivi4g04587 490 SUPERFAMILY ALDH-like 18 462 IPR016161 GO:0016491
Vivi4g04587 490 CDD ALDH_F3FHI 19 449 - -
Vivi4g04587 490 PANTHER ALDEHYDE DEHYDROGENASE 17 481 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04587 Vivi-Chr4 173742021 173758503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04587 72 488 Aldehyde Dehydrogenase Gene Family AT1G44170 73.810 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04587 K00128 - gmx:100816594 781.941