Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04585 ATGGGAGATTCCAAGGTTGAAACAATTTCACGATTAGCTCAATGGAAAATCGACAACTTTGGACCCTGTTCTTACAAGAAATCCGACCCTTTCAAACTCGGAATTTGGAACTGGTACTTGTCGATAGAGAGAAATAGGTATTTGTATATTCATCTGTTTCCTGAACCTTCGCGTGTTTCTAAAGAACAGCCTCCTATTGCTCGCTTTATTCTTCGAGTTTCTAATACTGCTTCATCTTCTTCCTCCTCCTCCTCTCGGAAATTTTATATTTCACCTGTTCATGAAAGGGTGCTTAGAACATGTGATGACTTTGTCTGGCCTGTGGATACTACATTCCTCGGTCGCTTGATTATTGATGTTGAATTTCTTGACCTGAAGATCTATCCTCTGAATAGTCAGGGTGGAGAAGCCAGTTCTATATGGCCATCTGACGGAAAACTGCAATCTGTTGCAACTCAAAACACTCTCCGATGCCTCTCTCGCATGCTTGACGAAGCTATACACGCTGATCTCACCATTATAACTGCAGACGGTACACTTAAAGCTCATAAAGCAGTTATGACTGCAACTTCTCCTGTGTTCGAGGCCTCATATCATGACAGCGACAATGAGAAAGATTCATCTACAATCCACATAGAAAACATGTCACAAGAATCATGCACAGCCCTTCTGAGTTACATCTACGGAACAATAAAGCCTGAAGATTTCTGGAAGCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATACGAAATCAGTGATTTGAAAGATGCGTGCGAGGAAAGCCTACTAGAAGATCTCAGCTCGGGAAATGTTCTTGATAGACTAAATGAGGCTTGGATGTACCAGCTGCACAAGTTGAAGAAAGGATGTTTTGCGTTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAAATAAATACGTTTTTTCGCCATGCTGAAAGGGAACTAATGTTGGAGATGTTTCAAGAAGTGCTTACAATTTGGAAATAG 999 0.4084 MGDSKVETISRLAQWKIDNFGPCSYKKSDPFKLGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPIARFILRVSNTASSSSSSSSRKFYISPVHERVLRTCDDFVWPVDTTFLGRLIIDVEFLDLKIYPLNSQGGEASSIWPSDGKLQSVATQNTLRCLSRMLDEAIHADLTIITADGTLKAHKAVMTATSPVFEASYHDSDNEKDSSTIHIENMSQESCTALLSYIYGTIKPEDFWKHRLALLGAANKYEISDLKDACEESLLEDLSSGNVLDRLNEAWMYQLHKLKKGCFAFLFDFGKIYDVRDEINTFFRHAERELMLEMFQEVLTIWK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04585 332 SUPERFAMILY POZ domain 151 265 IPR011333 -
Vivi4g04585 332 PANTHER OS08G0495500 PROTEIN-RELATED 1 332 IPR044714 -
Vivi4g04585 332 ProSiteProfiles BTB domain profile. 169 228 IPR000210 GO:0005515
Vivi4g04585 332 Pfam BTB/POZ domain 162 265 IPR000210 GO:0005515
Vivi4g04585 332 Gene3D Potassium Channel Kv1.1; Chain A 143 296 IPR011333 -
Vivi4g04585 332 SMART BTB_4 169 267 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04585 Vivi-Chr4 173711467 173714771 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi4g04585 BTB 1.6e-18 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04585 K10523 - gmx:100775687 550.051