Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04572 ATGAGGGAAAAGTCACCAGAAAACTCAGCTGTGCTAGCTAATGAGCAAGCAACATGCACTTTAAAGCCAGAAGATGTCATAGTGGACTTGGAGGTGGATGATGACAGTACTGTATCTGGGCAAGCGTGCATTTTTGGAAAATCAGATACCGAGCCACCGAGTATGTTTCTTCGTGAAAGAATGAGTTCTTTCTGCCATAGTTGTGAAGATAAGGCTGAGAGCAGCTTATGGATACACAAGTATAAACCAACAAAAGCCTCAGAGGTATGCGGTAATAATGAATCCCTGAAATTCTTGCGAGACTGGTTACATCTTTGGCATGAAAGACGTTACCAAAACAGAAAGGGTTCCTCTGACAAGGATCATATTGACATACCAAATGTTGATAGCGATTATAACTCTGCTGATTGTGACCATGCTTCAAAAGATGAGGGTTCCCTAAAGAATGTTCTCTTAATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCCCGAGAGCAAGGGTTTGAGGTTTTAGAGCTCAATGCATCAGATTGGCGAAATGGGGCTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGTGTCAAAAGTTTAGTGAAACACTCTGTGAGTTTAGAGAAGAGAACTGTGAATTTGCTCCCAACTACAGCTTTGCCTGATGTGAAAGCAGCCGAAGAGATGGCTGATGATGTGATTGAAATGATAGCCATATCCGATGTTGGAGATAATAGTCCTGGCGGAGCATCTCAGAAGTTGCACGACAATAATGGTGCACTTACATCTGGTACTGTCCAATCTTTAATTCTAGTTGAGGATGTTGACATCGTTTTTCCTGAAGACCGTGGATGTATTGCTGCCATACAACACATTGCCGAGACAGCAAAAGGGCCAATTATACTGACCAGCAACAGTTATAATGCTGGCCTGCCAATTAATCTCTGTCGACAACGTGTTTCTTTCTCATTGCCATTGCCGGATGAGTTGCTTTGCCATTTGTTCATGGTTTGTGGCACAGAAGAAGTCAACCTCAGTCCTCTTTTACTAGAGAAGTTTATCCAATCTTGTGACAGAGATATTCGTAAAACCATTATGCATCTTCAGTTCTGGCTGCAGAATAAAAAAGATAGTACAGACAAAAAAGTACAGACACTATATGGCTCACTTCCTTTTGATCTTGAGGCTGGTCATAAGATACTACCAAAGATGATACCTTGGAGTTTTCCCTCAGAGTTATCCAAACTAATTGAGAATGAAGTTTCCAAGTCAATAACCATAGCAGAAACTAACTCAAGATGGGAAGGGTTAGTTAACGAAGAGCTTTGCATAAATGACGAGCAAAATAGCTTAGATTTGCAGTGTACAGGAACTGGTTGTTTAGAGCCCAAGGTAGAGGTCATGAACAGAATTGAACCTATTGCAGACTGCGGTGAGTTTGATAGTCAATATAGTTCTATCACTGAGCTTAGCAATTGTTCTGGATCCCCAGTAACACCCTCTTTGCAAAAGGACCAAGGTCAACTTTTTGTGATGTCCTCTGATGATATGGATAAGGATCCAAATAGTAGACATTCTGTAAATGTTCATGACGAAGCTTACACGAGACAAACCCATGAAGGCAACACTGAATCTTTCTTTAAGTTTCTATTGAATCAAAGCTATGCCAACATGTCTTTTTGCGAGCTGCTGCATTCTAGTTTGGAAGATTCAGAGGAGGAACATTGTAAATATTTAGATACAACTTATGATGCATGCTTAAACAAAACACATAAATCACCTGATCTGTCCCGGTTTCCAGAACCAAGCTTTGTTTCCGAGACTGCAAAATCTGAAGTAGTGTCTTCTGGGCAGCTTGCCTGTCCAGTAGATGTTTCTCTGGATAATGAACTGAAACCATTCTCTTTCAGGGTTTGTCAGCCCGTGGCCAAAGTTCCTAAAGATCAAGATTTGTTGGTGAATACTGAAATTCCCAAATCTTCTCCAAGAGCAATTTCACAAGATTTTACTGATGTGAACATGGAAATTGCATCTGCATCTGTGATGGATCAGTGCAGTCAAACTGATTTAAAGTTGGACCCAAAGTCTGTTGACTGTTCATCTATTGAGATAGATCTGGTGCAAAATTCGTGGAGGAAACTTCGTGATTGTCAACCAGATTTAAGACAGCATGCCACCTCAGAACAGATAGGCGCCATCGAAGTTGTTAAACTTGCTAGTGGACTGAGCGATCTAATTTCAGAAGCTGACTTGTTATTTCGTAATCACCAACAAAAACAGTGTGGTATTATGGAACCTCCAATTTTCCTGGCTGATGATGCCACATTTAGTTGGTATGATGAGCAAATGATGATGTCAACGATTGCTGAACATGGTTTCTGCTTTTATGCCAAGCATATAGTTGACGCGGGATCCAAAGTCGGTTTTGAGAACAGGGTAGACGTAACTTTAGAGATGTTGGCTTCTACTACAAATATTATGGCTATGGGGAAGTTATCTAGACAGGACGACACCAAAACAATGAATAACCATACTAAAGAGCTATTAGAGGTGAACAGCACAAGAAATGATAAAAAGAGCAGTATGCAATACAACGAAAGCAGAACATCTCTGTTTAACGTGATCCGATCCATTGTTCCTAAAAGATCATCATCTGCAATTATAGGCATTGCATTCAATGAATTTCTCTCTTCACTACGCCAAATTTCAATTTCAGAGGGTTTCCGCATGTCACAAGGTGTTAAAAACATGAGAAAAGGAAGGCGAAGTGCTCAACATTATTTGAGCAGAGGTAAAATGTTGTCTCCGGAAGATATATCATTGTTGTGTGAAGGTGATTTGTACAGAAAGATATCTTCACAGTATGCTGCTAACATGGAAAATATAACAGAACATGATTGA 2919 0.4053 MREKSPENSAVLANEQATCTLKPEDVIVDLEVDDDSTVSGQACIFGKSDTEPPSMFLRERMSSFCHSCEDKAESSLWIHKYKPTKASEVCGNNESLKFLRDWLHLWHERRYQNRKGSSDKDHIDIPNVDSDYNSADCDHASKDEGSLKNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDWRNGAAVKQYFGDALGSHGVKSLVKHSVSLEKRTVNLLPTTALPDVKAAEEMADDVIEMIAISDVGDNSPGGASQKLHDNNGALTSGTVQSLILVEDVDIVFPEDRGCIAAIQHIAETAKGPIILTSNSYNAGLPINLCRQRVSFSLPLPDELLCHLFMVCGTEEVNLSPLLLEKFIQSCDRDIRKTIMHLQFWLQNKKDSTDKKVQTLYGSLPFDLEAGHKILPKMIPWSFPSELSKLIENEVSKSITIAETNSRWEGLVNEELCINDEQNSLDLQCTGTGCLEPKVEVMNRIEPIADCGEFDSQYSSITELSNCSGSPVTPSLQKDQGQLFVMSSDDMDKDPNSRHSVNVHDEAYTRQTHEGNTESFFKFLLNQSYANMSFCELLHSSLEDSEEEHCKYLDTTYDACLNKTHKSPDLSRFPEPSFVSETAKSEVVSSGQLACPVDVSLDNELKPFSFRVCQPVAKVPKDQDLLVNTEIPKSSPRAISQDFTDVNMEIASASVMDQCSQTDLKLDPKSVDCSSIEIDLVQNSWRKLRDCQPDLRQHATSEQIGAIEVVKLASGLSDLISEADLLFRNHQQKQCGIMEPPIFLADDATFSWYDEQMMMSTIAEHGFCFYAKHIVDAGSKVGFENRVDVTLEMLASTTNIMAMGKLSRQDDTKTMNNHTKELLEVNSTRNDKKSSMQYNESRTSLFNVIRSIVPKRSSSAIIGIAFNEFLSSLRQISISEGFRMSQGVKNMRKGRRSAQHYLSRGKMLSPEDISLLCEGDLYRKISSQYAANMENITEHD 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04572 972 Gene3D - 74 329 IPR027417 -
Vivi4g04572 972 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 45 959 IPR004582 GO:0006281
Vivi4g04572 972 Gene3D - 332 395 - -
Vivi4g04572 972 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 333 394 - -
Vivi4g04572 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 393 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04572 Vivi-Chr4 173459897 173467201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04572 73 188 Core DNA Replication Machinery Family AT5G22010 29.915 2.16e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04572 K26118 - gmx:100815984 1048.11