Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04570 ATGAACAACCCCTGCGATCTCGCCACACCTAATTCAAAATCAGTAGTTGAACAAACCGAAGAGCTTCAACCATCATGTGCCCCCAAAATCACCAACAAGAAGAGGAAATCACCAGGATTAACCACTCCTGCAAAGAAATCCTCCAGGAATAATACGCCGAGGAAAAAAGCTTTGGTTAGTGGAGTTAAGGGGAATACTTTGCCTGATGTGTTTCGGAAAATTGATTTGCGGTTGGAGGCGAAATTGTCAGCTGAGGAAAATTCAAAGATGTTTGCGGGAAAGCAGATACATCCGTTCTTTTCATCGTGGAAGGTGGAGAAGAAATCTAGGGATTCAGCTGGTTCAGAAGGCTGTTTGTCTGATGCTAAGGGGGGGAGTAGAAGAACTATATGTGGTTCTATTCATGTATTTGAAGATACTCGGGATTATACTTCATCTCTTGACTGGAGTGACTGGAAATTTTTGGGAAATACCACTGTTGTAGATTGTGGTCCAGAAAGTTCAAATTTATCTGTTTTGGAGGGTTCTATTGAACCCTTAAATTTTGATAACTTTCTTAGTGGTGTGAAACCCTCGAGCACTTCAATATCTCAGAATGCATTGTCTTATTCAGATAAACTATGTACACTGTCAGAAAATATGAGGGAAAAGTCACCAGAAAACTCAGCTGTGCTAGCTAATGAGCAAGCAACATGCACTTTAAAGCCAGAAGATGTCATAGTGGACTTGGAGGTGGATGATGACAGTACTGTATCTGGGCAAGCGTGCATTTTTGGAAAATCAGATACCGAGCCACCGAGTATGTTTCTTCGTGAAAGAATGAGTTCTTTCTGCCATAGTTGTGAAGATAAGGCTGAGAGCAGCTTATGGATACACAAGTATAAACCAACAAAAGCCTCAGAGGTATGCGGTAATAATGAATCCCTGAAATTCTTGCGAGACTGGTTACATCTTTGGCATGAAAGACGTTACCAAAACAGAAAGGGTTCCTCTGACAAGGATCATATTGACATACCAAATGTTGATAGCGATTATAACTCTGCTGATTGTGACCATGCTTCAAAAGATGAGGGTTCCCTAAAGAATGTTCTCTTAATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCCCGAGAGCAAGGGTTTGAGGTTTTAGAGCTCAATGCATCAGATTGGCGAAATGGGGCTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGTGTCAAAAGTTTAGTGAAACACTCTGTGAGTTTAGAGAAGAGAACTGTGAATTTGCTCCCAACTACAGCTTTGCCTGATGTGAAAGCAGCCGAAGAGATGGCTGATGATGTGATTGAAATGATAGCCATATCCGATGTTGGAGATAATAGTCCTGGCGGAGCATCTCAGAAGTTGCACGACAATAATGGTGCACTTACATCTGGTACTGTCCAATCTTTAATTCTAGTTGAGGATGTTGACATCGTTTTTCCTGAAGACCGTGGATGTATTGCTGCCATACAACACATTGCCGAGACAGCAAAAGGGCCAATTATACTGACCAGCAACAGTTATAATGCTGGCCTGCCAATTAATCTCTGTCGACAACGTGTTTCTTTCTCATTGCCATTGCCGGATGAGTTGCTTTGCCATTTGTTCATGGTTTGTGGCACAGAAGAAGTCAACCTCAGTCCTCTTTTACTAGAGAAGTTTATCCAATCTTGTGACAGAGATATTCGTAAAACCATTATGCATCTTCAGTTCTGGCTGCAGAATAAAAAAGATAGTACAGACAAAAAAGTACAGACACTATATGGCTCACTTCCTTTTGATCTTGAGGCTGGTCATAAGATACTACCAAAGATGATACCTTGGAGTTTTCCCTCAGAGTTATCCAAACTAATTGAGAATGAAGTTTCCAAGTCAATAACCATAGCAGAAACTAACTCAAGATGGGAAGGGTTAGTTAACGAAGAGCTTTGCATAAATGACGAGCAAAATAGCTTAGATTTGCAGTGTACAGGAACTGGTTGTTTAGAGCCCAAGGTAGAGGTCATGAACAGAATTGAACCTATTGCAGACTGCGGTGAGTTTGATAGTCAATATAGTTCTATCACTGAGCTTAGCAATTGTTCTGGATCCCCAGTAACACCCTCTTTGCAAAAGGACCAAGGTCAACTTTTTGTGATGTCCTCTGATGATATGGATAAGGATCCAAATAGTAGACATTCTGTAAATGTTCATGACGAAGCTTACACGAGACAAACCCATGAAGGCAACACTGAATCTTTCTTTAAGTTTCTATTGAATCAAAGCTATGCCAACATGTCTTTTTGCGAGCTGCTGCATTCTAGTTTGGAAGATTCAGAGGAGGAACATTGTAAATATTTAGATACAACTTATGATGCATGCTTAAACAAAACACATAAATCACCTGATCTGTCCCGGTTTCCAGAACCAAGCTTTGTTTCCGAGACTGCAAAATCTGAAGTAGTGTCTTCTGGGCAGCTTGCCTGTCCAGTAGATGTTTCTCTGGATAATGAACTGAAACCATTCTCTTTCAGGGTTTGTCAGCCCGTGGCCAAAGTTCCTAAAGATCAAGATTTGTTGGTGAATACTGAAATTCCCAAATCTTCTCCAAGAGCAATTTCACAAGATTTTACTGATGTGAACATGGAAATTGCATCTGCATCTGTGATGGATCAGTGCAGTCAAACTGATTTAAAGTTGGACCCAAAGTCTGTTGACTGTTCATCTATTGAGATAGATCTGGTGCAAAATTCGTGGAGGAAACTTCGTGATTGTCAACCAGATTTAAGACAGCATGCCACCTCAGAACAGATAGGCGCCATCGAAGTTGTTAAACTTGCTAGTGGACTGAGCGATCTAATTTCAGAAGCTGACTTGTTATTTCGTAATCACCAACAAAAACAGTGTGGTATTATGGAACCTCCAATTTTCCTGGCTGATGATGCCACATTTAGTTGGTATGATGAGCAAATGATGATGTCAACGATTGCTGAACATGGTTTCTGCTTTTATGCCAAGCATATAGTTGACGCGGGATCCAAAGTCGGTTTTGAGAACAGGGTAGACGTAACTTTAGAGATGTTGGCTTCTACTACAAATATTATGGCTATGGGGAAGTTATCTAGACAGGACGACACCAAAACAATGAATAACCATACTAAAGAGCTATTAGAGGTGAACAGCACAAGAAATGATAAAAAGAGCAGTATGCAATACAACGAAAGCAGAACATCTCTGTTTAACGTGATCCGATCCATTGTTCCTAAAAGATCATCATCTGCAATTATAGGCATTGCATTCAATGAATTTCTCTCTTCACTACGCCAAATTTCAATTTCAGAGGGTTTCCGCATGTCACAAGGTGTTAAAAACATGAGAAAAGGAAGGCGAAGTGCTCAACATTATTTGAGCAGAGGTAAAATGTTGTCTCCGGAAGATATATCATTGTTGTGTGAAGGTGATTTGTACAGAAAGATATCTTCACAGTATGCTGCTAACATGGAAAATATAACAGAACATGATTGA 3558 0.4056 MNNPCDLATPNSKSVVEQTEELQPSCAPKITNKKRKSPGLTTPAKKSSRNNTPRKKALVSGVKGNTLPDVFRKIDLRLEAKLSAEENSKMFAGKQIHPFFSSWKVEKKSRDSAGSEGCLSDAKGGSRRTICGSIHVFEDTRDYTSSLDWSDWKFLGNTTVVDCGPESSNLSVLEGSIEPLNFDNFLSGVKPSSTSISQNALSYSDKLCTLSENMREKSPENSAVLANEQATCTLKPEDVIVDLEVDDDSTVSGQACIFGKSDTEPPSMFLRERMSSFCHSCEDKAESSLWIHKYKPTKASEVCGNNESLKFLRDWLHLWHERRYQNRKGSSDKDHIDIPNVDSDYNSADCDHASKDEGSLKNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDWRNGAAVKQYFGDALGSHGVKSLVKHSVSLEKRTVNLLPTTALPDVKAAEEMADDVIEMIAISDVGDNSPGGASQKLHDNNGALTSGTVQSLILVEDVDIVFPEDRGCIAAIQHIAETAKGPIILTSNSYNAGLPINLCRQRVSFSLPLPDELLCHLFMVCGTEEVNLSPLLLEKFIQSCDRDIRKTIMHLQFWLQNKKDSTDKKVQTLYGSLPFDLEAGHKILPKMIPWSFPSELSKLIENEVSKSITIAETNSRWEGLVNEELCINDEQNSLDLQCTGTGCLEPKVEVMNRIEPIADCGEFDSQYSSITELSNCSGSPVTPSLQKDQGQLFVMSSDDMDKDPNSRHSVNVHDEAYTRQTHEGNTESFFKFLLNQSYANMSFCELLHSSLEDSEEEHCKYLDTTYDACLNKTHKSPDLSRFPEPSFVSETAKSEVVSSGQLACPVDVSLDNELKPFSFRVCQPVAKVPKDQDLLVNTEIPKSSPRAISQDFTDVNMEIASASVMDQCSQTDLKLDPKSVDCSSIEIDLVQNSWRKLRDCQPDLRQHATSEQIGAIEVVKLASGLSDLISEADLLFRNHQQKQCGIMEPPIFLADDATFSWYDEQMMMSTIAEHGFCFYAKHIVDAGSKVGFENRVDVTLEMLASTTNIMAMGKLSRQDDTKTMNNHTKELLEVNSTRNDKKSSMQYNESRTSLFNVIRSIVPKRSSSAIIGIAFNEFLSSLRQISISEGFRMSQGVKNMRKGRRSAQHYLSRGKMLSPEDISLLCEGDLYRKISSQYAANMENITEHD 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04570 1185 Gene3D - 287 542 IPR027417 -
Vivi4g04570 1185 MobiDBLite consensus disorder prediction 1 26 - -
Vivi4g04570 1185 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 12 1172 IPR004582 GO:0006281
Vivi4g04570 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 606 IPR027417 -
Vivi4g04570 1185 MobiDBLite consensus disorder prediction 1 59 - -
Vivi4g04570 1185 Gene3D - 545 608 - -
Vivi4g04570 1185 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 546 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04570 Vivi-Chr4 173459068 173467201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04570 286 401 Core DNA Replication Machinery Family AT5G22010 29.915 2.75e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04570 K26118 - gmx:100815984 1239.94