Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04565 ATGGCAGAAACATGTGATAAAATGATCAAGGGGTTACGCAACTTGAAGCCTTACCTTGCTATGGTGTCCCTTCAATTTGGTTATGCAGGAATGTATATCATCACTATGGTTTCATTCAAGCATGGCATGAGTCATTGGGTTCTCTCCGTCTACCGTCATATTGTCGCTACTCTCTTCATGGCTCCCTTCGCCCTCGTCCTCGAAAGAAAAATTAGGCCAAAGATGACACTCCCAATTTTCTTGAGGTTGGCTGTTCTTGGATTCCTTGAACCCGTGCTTGATCAGAATTTGTACAACCTGGGAATGAAGAATACTTCAACAACGTTTGCATCTGCCACTGTCAACATTCTCCCAGCTATTACTTTTATAATGGCAATCATTTTCAGGTTAGAAACAGTGAACTTTAGAAAAATCCACAGTGTTGCAAAGGTTGTGGGAACAGTTGTGACTGTATCAGGAGCAATGGTTATGACTTTGTACAAAGGCCCTGCACTTCAAATCATAAAGGGTCATGCAGGAAGTCAACATGAAAGTGGAAGCAGTGAATCCTCTGAACAAAACTGGGTGCTTGGCACTATTATGCTCATTTCAAGTTGTTGCGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTATCCAGCAGAGCTTTCTATGACTGCATGGATTTGCTTCTTGGGTATATTTGAAGGTGGAATTGCAACATTTATATTTGAACGTGACATGAGTGTATGGTCATTAGGGTTTGACTCTAGGCTTCTTGCTTGTGTTTACTCTGGTATTGTGTGCTCTGGAATGGCTTACTATATACAAGGTGTTGTGACTAGGGAACGTGGACCTGTGTTTGTTACTTCTTTCAGTCCTTTATGTATGATCATCACAGCTGCATTGGGTTCTATTGTCTTAGCTGAACAAACTCACTTGGGAAGTATAATTGGAGCTATTATCATTGTGTGTGGACTATACACTGTGGTGTGGGGGAAAAGCAAAGATAGTGTGAATACAATTGAAGCAACACAAAGTGAGGGACAAGAGTTGCCAATAAAGGATGGAGCAAGAACAGGGTCAGACATTTTTGAAAGTATTGAGGTCAACGTTCCTAAGGTTGGAGGAAAGAATAATGGCAAACCATAA 1143 0.4112 MAETCDKMIKGLRNLKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHIVATLFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNFRKIHSVAKVVGTVVTVSGAMVMTLYKGPALQIIKGHAGSQHESGSSESSEQNWVLGTIMLISSCCGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGGIATFIFERDMSVWSLGFDSRLLACVYSGIVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNTIEATQSEGQELPIKDGARTGSDIFESIEVNVPKVGGKNNGKP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04565 380 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Vivi4g04565 380 Pfam EamA-like transporter family 29 150 IPR000620 GO:0016020
Vivi4g04565 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 332 - -
Vivi4g04565 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 152 - -
Vivi4g04565 380 PANTHER WAT1-RELATED PROTEIN 17 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04565 Vivi-Chr4 173387958 173392191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04565 12 361 Nodulin-like Gene Family AT1G44800 64.306 2.44e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04565 - - tpra:123903307 654.44