Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04557 ATGGAACGTTACAAGATATTGAGGGATATTGGTTCAGGGAACTTTGGTGTGGCTAGGTTGGCCAAACACATCAGCACAGGAGAGCTTGTTGCTATCAAATATATTGAAAGAGGATATAAGATTGATGAGAATGTTCAAAGGGAGATAATTAACCATCAATCTTTAAGGCATCCAAATATCATCAGATTCAAAGAGGTTTTTGTGACACCTACTCATTTGGCTATTGTTCTTGAGTATGCTGCTGGTGGTGAACTTTTTGATAGAATATGTTTGGCCGGTCGATTTAGTGAAGATGAGGCAAGATATTTCTTTCAACAACTAATATCTGGAGTTAGCTATTGTCATTCCATGGAAATTTGTCATAGAGACTTGAAATTGGAAAACACTCTATTGGATGGAAATCCAATTCCTCAGCTTAAAATTTGTGACTTTGGTTTCTCCAAGTCTGCTATACTCCACTCTCAACCTAAATCAACAGTTGGAACACCTGCATACATTGCACCTGAGATTTTGTCTAGAAAGGAGTATGATGGAAAGATGGCAGATGTATGGTCATGTGGTGTAACTCTTTATGTTATGCTAGTTGGATCATATCCATTTGAAGACCCAGATGATCCCAGAAATTTTAGAAAGAATATTGCGAAAATAATGAATGTTGAATACTCTATACCTGATTATATACGTGTATCACCAGACTGTAGTCAACTTTTATCTCGTATTTTTGTTGTCGATCCAACTAAGAGGATTACAGTGTTAGAGATAAAACAACACCCTTGGTTTTTGAAGAACATGCCTAGAGAAGTGGTGGAGAATGATAGAAAATGTAGCAAGAAATCAGAAAAAGAAGAAATAACAAGTCAAAGTGTGGATGAAATTATGGGAATTGTACGAGAAGCAATGATTCCATGTTCAATAGATGCTGATGATGTCGATGAGATTGAAGAGAAGGTTGACCACAGTGGTGATTGTGTGTGA 975 0.3682 MERYKILRDIGSGNFGVARLAKHISTGELVAIKYIERGYKIDENVQREIINHQSLRHPNIIRFKEVFVTPTHLAIVLEYAAGGELFDRICLAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPIPQLKICDFGFSKSAILHSQPKSTVGTPAYIAPEILSRKEYDGKMADVWSCGVTLYVMLVGSYPFEDPDDPRNFRKNIAKIMNVEYSIPDYIRVSPDCSQLLSRIFVVDPTKRITVLEIKQHPWFLKNMPREVVENDRKCSKKSEKEEITSQSVDEIMGIVREAMIPCSIDADDVDEIEEKVDHSGDCV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04557 324 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Vivi4g04557 324 PANTHER SERINE/THREONINE KINASE 2 283 - -
Vivi4g04557 324 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04557 324 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04557 324 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Vivi4g04557 324 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Vivi4g04557 324 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Vivi4g04557 324 SUPERFAMILY Protein kinase-like (PK-like) 1 271 IPR011009 -
Vivi4g04557 324 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04557 324 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Vivi4g04557 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04557 Vivi-Chr4 173120661 173123109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04557 3 264 CBL-interacting serine-threonine protein kinases AT5G25110 44.322 2.71e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vivi4g04557 Pkinase 3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04557 K14498 - gmx:100817713 503.827