Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04541 ATGGCGAGAGGATTGAAAGTTCTATCAGCTCTTGACTCAGCAAAAACACAATACTACCATTTCAAAGCCATCATCATAGCAGGGATGGGACTTTTCTCAGACTCCTACGACCTCTTCTCCATAACCCTCATCACAAAGATGCTCGGAAGAATATACTACTCCGACGAAAACAAAATCCGGCAAGTCAACCCTATCGTCGTCTCCGCCCTCATCTCCGTCGCGTTACTAGGCACCGCGATAGGTCAGCTCGTATTCGGGCGCCTCGGTGACCTGAAAGGCCGGCGCCACGTCTACGGGATGGCCTTAATGTTGATGATAATAAGCTCTTTAGCTTCCGGCTTCTCCATTTGTACGACAAAGAGAGCTTGTGTTTTGCTTTCTCTTGGTTTCTTTAGATTCTTCTTGGGACTGGGGATTGGTGGTGATTATCCATTGTCATCTACTATTATGTCTGAGTTTGCTAATAAGAAGACTAGAGGGTCTTTTATAGCTGCGGTTTTTTCTATGCAAGGGTTTGGTATATTGGCTAGTGCCACGGTTACTATGGTGGTTTGCTCGATTTTTCGCCGCGGTTCGAAGCCGGAGTCGGCTTATGATGTGCCGGCGGAGGCTGATGTTGCATGGAGATTGATATTAATGATTGGTTCTATTCCGGCGGCCTTGACTTATTACTGGCGGATGATGATGCCCGAAACTGCCAGATATACAGCATTAGTGGAACAAAATGTGTTGCAAGCAGCAAAGGACATGGAGAAAGTTCTAGATGTATCAATGAGCCAAATAGCCGAAGAAGATTCATCACCACCAAGCACAAATGCTGCATCATACCCTCTTCTTTCAAGAGAATTCCTGCGTCGACACGGCCGCGATCTTTTCGCCTGTTCTGCTAACTGGTTTCTCTTGGACATAGTGTTTTACAGTCAAGTTCTTTTCCAAGGTGAAATATACAAGCGATACCTTAAGCCGAATGACGAGCACGATGTGTATCAAGAAGCATTCTATCTTGCAAGAATCCAAGCCATTCTTGCTGTTTGTTCCACAATCCCCGGCTACTTCTTTACCGTCTACTTCATTGATCGCGTAGGACGAGTCAAGATTCAAATGATGGGTTTTTTCTTCATGGCAGTGTCGTTTTTCGCTATAGGGGTTCCCTATTACTCTCATTGGACAAGTCCTGATAACCATGATAACAAAGGGTTCATGGTTCTCTATGGACTCGCTTTCTTCTTTGCGAATTTTGGGCCTAATACTACGACTTTTATTGTCCCGGCCGAACTCTTTCCGGCTAGGTTTAGGTCGACGTGTCATGGAATTTCGGGAGCTGTTGGCAAGGTTGGTGCAATCATTGGTTCTGTTGGGTTTTTATGGGCTTCACATAATAAGGAGGAGGAAGGATATCCGAAAGGATTTGGAATGAAAGCTTCACTTATCATACTTGGAGTGGTGTGTATAGTTGGAATGTTTGTTACTTACTTTTTCACCAAGGAAACTATGGGAAGGTCTTTGGAAGAGAATGAAGTTGAACAGTCTCATCATAGTGAAGAATATAATGATCTTTGA 1560 0.4442 MARGLKVLSALDSAKTQYYHFKAIIIAGMGLFSDSYDLFSITLITKMLGRIYYSDENKIRQVNPIVVSALISVALLGTAIGQLVFGRLGDLKGRRHVYGMALMLMIISSLASGFSICTTKRACVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILASATVTMVVCSIFRRGSKPESAYDVPAEADVAWRLILMIGSIPAALTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVSMSQIAEEDSSPPSTNAASYPLLSREFLRRHGRDLFACSANWFLLDIVFYSQVLFQGEIYKRYLKPNDEHDVYQEAFYLARIQAILAVCSTIPGYFFTVYFIDRVGRVKIQMMGFFFMAVSFFAIGVPYYSHWTSPDNHDNKGFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHNKEEEGYPKGFGMKASLIILGVVCIVGMFVTYFFTKETMGRSLEENEVEQSHHSEEYNDL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04541 519 CDD MFS_PhT 24 497 - -
Vivi4g04541 519 Pfam Sugar (and other) transporter 25 506 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi4g04541 519 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 504 - -
Vivi4g04541 519 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi4g04541 519 Gene3D MFS general substrate transporter like domains 19 519 IPR036259 -
Vivi4g04541 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 498 IPR020846 GO:0022857
Vivi4g04541 519 FunFam Inorganic phosphate transporter 1-6 19 519 - -
Vivi4g04541 519 SUPERFAMILY MFS general substrate transporter 11 506 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04541 Vivi-Chr4 172840824 172848858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04541 5 519 Inorganic Solute Cotransporters AT1G76430 62.147 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04541 K08176 - gmx:100797683 796.964