Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04415 ATGAGGTTTTACCTCAAAACTGATTCAAATCAAAATATGAACACTCCTAAAAAATCCAAAGTTACTACAAAGGAAAAGATGGAGAAGTGTAATTTACCAAATAAAAGGAAAAGAGATTGGGTTGATGCACTTTTAATAGATAATTTTGGAATTTGCAAAAACCACACAGAAAAGTTGAATGAGAAGAACACATTTTGTGTAGATTGTGGAATGAGTTTATGTAAACATGGCAAAGAATCTCATTCTCTTCATCAAAAGCTTCAAATTTATAAATATTGCTATCAAGATGTTGTCAAATTTTCTGACCTAGTCAAGGTTTTTGATTGCTCAAATATTCAGACTTATATGTCAAATAATTTTAAGATTGTGCACCTTAAATCAAAGAAACAAAAACAAGCAACAAAATCCAAAGAAACAAAAGCATCAACACCTAAAAATATAGCTGGTGGAATTTGTGAAGAATGTGGGAAATATTTACTAGATAAGAGAAGTCGATTTTGTTCGGTTAGATGTAAGATTTCAATTGACGAGGTTGAAGTGAAGAAAAGTCCAGAGGCTGAGTCATCTATCTCTATGGCTGAACAATATGAATATGTTGAAAGAGGTTATAGGTTTTGGTGA 621 0.3124 MRFYLKTDSNQNMNTPKKSKVTTKEKMEKCNLPNKRKRDWVDALLIDNFGICKNHTEKLNEKNTFCVDCGMSLCKHGKESHSLHQKLQIYKYCYQDVVKFSDLVKVFDCSNIQTYMSNNFKIVHLKSKKQKQATKSKETKASTPKNIAGGICEECGKYLLDKRSRFCSVRCKISIDEVEVKKSPEAESSISMAEQYEYVERGYRFW 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04415 206 Pfam PLATZ transcription factor 91 173 IPR006734 -
Vivi4g04415 206 MobiDBLite consensus disorder prediction 1 18 - -
Vivi4g04415 206 MobiDBLite consensus disorder prediction 1 20 - -
Vivi4g04415 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 36 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04415 Vivi-Chr4 170911857 170913354 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi4g04415 PLATZ 5.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04415 - - vvo:131598311 415.616