Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04414 ATGCCTCTCTCAATCTCCACTTTCTTCTTCTTGTTCTTCCTCTTCAATCTCCAACCCTCAACCTCCCAACAACAACTCAAATCCTTCAACACCTCACTCTCACCATGGCTCCCCTCCCAAAACCGAACCCTCACCTCACCAAACTCCAACTTCACAGCCGGTTTCTTCCCCATCCCAAACTCACAAAACCTCTTCACCTTCTCAATATGGTTCTCCAAAATCCCTCATTCCTCAGACCCCATCATCTGGAGCATCTCCACAAAACTCAACTCATCTTCCTCTCTCATCATAACCTCAAAAGGTGAACTCTTGCTCAACAATCTTCCCTTTATTCATAACTCTTCCAATTCTAATTCCACACAACTTGTTCTTTATGATAGTGGAAACTTAGTTTTTGGAAGTTGGACTAGCTTTTCAAATCCAACTAACACTATATTACCAAACCAAAACATCACTGGAATTGAAATTGTGTCAAGTAATAACAAGTTCAAGTTTATTAATTCTCAGAATTTGATTCTCAATGATGATTCTTCATCATCAAATTCATCTCAATACTATAGTACACCTAGTGCTTTGTTGTTTATGGATGATGCTGGAAAAATGAGTATGCAAAGTAGCTCTTTTCTTACTTCTGATTATGGTGATTCTAGGTTAAGAAAACTTGTTCTTAATGATGATGGAAATTTGAGAATTTATAGCTTTTATCCTGAACAGAAAAACACATGGGTTATTGTTTGGTTAGCAATTTGGGAAATGTGTAAAATCAAAGGGAAGTGTGGACCTAATTCAATTTGTATGCCTAGAGAAGATTTCTACAATTCTACCTTTTGTGTTTGTCCTTCTGGTTTTGAGCCTGTTGAAGGTGGGAGTGAAGTTGGTTGTAAGAGGAAAATTCCACTTACAAGTAACACTCATTTTGTTAGGCTTGATTATGTTAACTATACGAGTAGCGGTTCGATGAATCAAATCTATGCTTTAAACTATACAATTTGTGAAGCAAGTTGTATAAGAAACTCGAGTTGTCTTGGATTTGGATTCAAGTATGATGGATCGGGCTATTGTGTTTCGTTACACGGTAAACAGCTTCAATATGGTATGTGGTCGCCCGGGACTGAACTCGCTTTGTTTTTGAAAGTTGATCAGAAGGAATCTGAAGGTTCGAATTTCATTGGTATGACGGAGGTGATGCAGACGACTTGTCCTGTGAGGATAAGTTTGCCTTTACCGCCGAAGGATTCGAACACTACGACGAGGAATATTGTGATTATATGCACACTTTTTGCGGCGGAACTTATTGCTGGTGTGGCTTTCTTTTGGTCTTTCCTTAAGAGGTATATTAAGTATAGGGACATGGCTACCACTTTAGGGCTTGAGCTTTTACCTGCGGGTGGTCCGAAGCGGTTTACCTACTCGGAGATCAAAGCCGCGACTAATGATTTCTCGAATCTCATTGGGAAAGGTGGGTTTGGAGATGTCTACAAAGGTGAGTTGCCGGATCATCGTGTTGTCGCGGTGAAGTGTTTGAAGAATGTTACCGGTGGTGACGCTGAGTTTTGGGCGGAAGTTACTATCATTGCAAGGATGCATCACTTGAACTTGGTTCGATTGTGGGGCTTCTGCGCCGAGAAAGGTCAAAGGATACTTGTTTATGAATACATCCCAGGTGGATCGTTGGATAAGTATCTCTTTAGAGTCAAATCTCGTAAGGGTAGTGGTGAATCAGAATCTGAACAAAGTCATGATAATAGTTCAACTCCGAGTACCTTAGAAAAACCTGTTTTGGATTGGAACATGAGGTATAGAATTGCTCTTGGTATGGCTCGGGCTATCGCGTATCTACACGAGGAGTGTTTGGAATGGGTTTTGCATTGTGATATTAAGCCAGAGAACATTCTCTTAGGCGATGATTGTTGTCCTAAGATATCGGATTTCGGATTGGCGAAACTAAGGAAAAAAGAAGACATGGTGACTATGTCAAGAAGGCGAGGAACTCCTGGTTATATGGCACCGGAATGGATAACAGCGGATCCAATAACTTCAAAAGCCGATGTTTATAGTTTCGGTATGGTGCTGTTGGAGCTTGTGAGCGGAGTGAGAAACTTCGAGATTCAAGGATCTGTGTTGAGGAGTGATGAATGGTATTTTCCGGGATGGGCTTTCGATAAGATGTTTAAGGAAATGAGAGTTGAAGAAATTCTTGATAGTCAAATTGCTCATGCTTATGATAGTAAATCGCATTTTCAGTTGGTTAATCGAATGGTGAAGACTGCAATGTGGTGTTTGCAGGATAGGCCTGAGGCAAGGCCAACAATGGGGAAGGTAGCTAAGATGATAGAAGGGACTGTGGAGATCATGGAACCTAAGAAGCCAACTGTTTTCTTCCTCGGAGAAGAGTAG 2397 0.4097 MPLSISTFFFLFFLFNLQPSTSQQQLKSFNTSLSPWLPSQNRTLTSPNSNFTAGFFPIPNSQNLFTFSIWFSKIPHSSDPIIWSISTKLNSSSSLIITSKGELLLNNLPFIHNSSNSNSTQLVLYDSGNLVFGSWTSFSNPTNTILPNQNITGIEIVSSNNKFKFINSQNLILNDDSSSSNSSQYYSTPSALLFMDDAGKMSMQSSSFLTSDYGDSRLRKLVLNDDGNLRIYSFYPEQKNTWVIVWLAIWEMCKIKGKCGPNSICMPREDFYNSTFCVCPSGFEPVEGGSEVGCKRKIPLTSNTHFVRLDYVNYTSSGSMNQIYALNYTICEASCIRNSSCLGFGFKYDGSGYCVSLHGKQLQYGMWSPGTELALFLKVDQKESEGSNFIGMTEVMQTTCPVRISLPLPPKDSNTTTRNIVIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRVKSRKGSGESESEQSHDNSSTPSTLEKPVLDWNMRYRIALGMARAIAYLHEECLEWVLHCDIKPENILLGDDCCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEIQGSVLRSDEWYFPGWAFDKMFKEMRVEEILDSQIAHAYDSKSHFQLVNRMVKTAMWCLQDRPEARPTMGKVAKMIEGTVEIMEPKKPTVFFLGEE 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04414 798 Gene3D Transferase(Phosphotransferase) domain 1 555 790 - -
Vivi4g04414 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi4g04414 798 Gene3D Phosphorylase Kinase; domain 1 452 552 - -
Vivi4g04414 798 FunFam Serine/threonine-protein kinase 553 789 - -
Vivi4g04414 798 SUPERFAMILY Protein kinase-like (PK-like) 461 778 IPR011009 -
Vivi4g04414 798 ProSiteProfiles PAN/Apple domain profile. 294 380 IPR003609 -
Vivi4g04414 798 SMART serkin_6 478 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04414 798 Pfam Protein kinase domain 482 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04414 798 FunFam S-receptor-like serine/threonine-protein kinase 450 552 - -
Vivi4g04414 798 CDD STKc_IRAK 484 780 - -
Vivi4g04414 798 ProSiteProfiles Protein kinase domain profile. 478 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04414 798 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Vivi4g04414 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Vivi4g04414 798 Gene3D - 36 141 IPR036426 -
Vivi4g04414 798 Pfam S-locus glycoprotein domain 201 286 IPR000858 GO:0048544
Vivi4g04414 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 151 IPR036426 -
Vivi4g04414 798 PANTHER OS07G0415500 PROTEIN 4 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04414 Vivi-Chr4 170902595 170905364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04414 466 790 Receptor kinase-like Gene Family AT4G18250 39.759 1.83e-76 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi4g04414 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04414 - - gmx:100775518 1272.69