Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04413 ATGATAACCTTTGTCAAACACTTCTCATCTGGTCATCCTGATTCATTCATCAACAACATGGTTTCCAAGTATGGACGAATAGGTATCTACAAGTCACACTTGTTTGGAAGTCCAGGCATCATCGTTTGTGATGCTGATCTGATTATGAGTGTGCTTACCGATGAAGAGACTTATAAGTTCAGTTATCCAAAATCGACAGTAGAATTACTCAAATATAAACGCTATTGGAATTTCTCTCGAAAAGAACACTTGCTCTTTAGACGCATAATTTCTTCTCTTACTATGAACAACAATTCCTTAGAAAATTACCTATCAAGTATAGAGGACGTCATGATCAAATCCTTGGAGGGTTTTGCTAGCATGAATCATCCAATTGAGTTGTTGAAAGATATGAAGAATATTTCCTTTAAAGTTATCGTTGGTATTTTCATGGGTTCTTGTGATCCACAATTCATCACAAAGATAGGGAATTCTTTTACTCTTATGCACAAGGCTTTGTTTTGTATGCCAATTAATCTTCCAGGGTTTGCTTTTCGTAGAGGACTCATTGCACGTGAGAAGCTAGCCAAATTAGTTAAACCTATTGTGAAAGAAAGGAGGTTGATGGTAAGAAATGGTGACAAAAAAAATTTACTTGATATTCTTTTACAAGTAAATGAAGATGGTTGGAACCCAGATGATGATGATATTATTCAAATGTTGATAGCAATGGTACTTGCTGGTCATGAAACCACTGCACATGGTATGATGTGGTCAATTATATATCTTACACAAAATCCACATATCATGAAAAAGGCTAAGGAGGAGCAGGAGGAAATCATCAAGGCAAGACAGGGCACAAAGAAAAAATTAAGTTTTGAAGAGATTAAGAAAATGGTTTATCTCTCTCAAATAATCGATGAAACATTACGTCATATCAGTCTTACCTTTGCACTTTTTCGAGAAACAACTAGAGACGTTAACATCAATGGTTATATAATACCAAAAGGATGGAAAGTGCTTCCTTGGTTAAAAGCTATGCATAAGGATCCTACACATTATTCAAATCCAGATGAATTTAATCCATCAAGATGGAATGATCACAATACCAAAAATGGAACCTTCATTCCTTTTGGAGTAGGAAATAGGCTCTGCCCTGGAAACAACTTGGCCAAAATTGAAATTTATGTATTTCTACATCATTTCATTCTCAATTACAAGTAA 1203 0.35 MITFVKHFSSGHPDSFINNMVSKYGRIGIYKSHLFGSPGIIVCDADLIMSVLTDEETYKFSYPKSTVELLKYKRYWNFSRKEHLLFRRIISSLTMNNNSLENYLSSIEDVMIKSLEGFASMNHPIELLKDMKNISFKVIVGIFMGSCDPQFITKIGNSFTLMHKALFCMPINLPGFAFRRGLIAREKLAKLVKPIVKERRLMVRNGDKKNLLDILLQVNEDGWNPDDDDIIQMLIAMVLAGHETTAHGMMWSIIYLTQNPHIMKKAKEEQEEIIKARQGTKKKLSFEEIKKMVYLSQIIDETLRHISLTFALFRETTRDVNINGYIIPKGWKVLPWLKAMHKDPTHYSNPDEFNPSRWNDHNTKNGTFIPFGVGNRLCPGNNLAKIEIYVFLHHFILNYK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04413 400 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Vivi4g04413 400 PANTHER CYTOCHROME P450 26 11 399 - -
Vivi4g04413 400 Pfam Cytochrome P450 9 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 Gene3D Cytochrome P450 1 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 Coils Coil 263 283 - -
Vivi4g04413 400 PRINTS E-class P450 group I signature 249 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS E-class P450 group I signature 336 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS E-class P450 group I signature 229 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS E-class P450 group I signature 378 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS P450 superfamily signature 240 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04413 400 SUPERFAMILY Cytochrome P450 8 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04413 Vivi-Chr4 170888517 170892267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04413 1 400 Cytochrome P450 AT2G32440 42.327 3.06e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04413 K04123 - ag:BAG68929 479.944