Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04412 ATGGATATACAATATTGGGTTTGGACTTATGCCCTTTTGTTAGCAACCTATTTTTGTATGTTCAATTTTGTGTGGAGATTGAATGAGTGGTATTATAGTATAAAATTAAGAAAGAAACAATACACTCTGCCTCCTGGTGATTTGGGATGGCCTTTTGTAGGAAATATGCTGGCCTTTATTAAACATTTCAAATCTGGTCATCCTGATTTGTTCATCAACAACCTTGTCTCCAAGTATGGACAAAACGGTATCTATAAGATGCACTTATTTGGAAATCCAAGCATCATTATTTGTGAGGCGGAGATGTGTAAAAGGGTTTTGACAGATGATGAGACCTTTAAAATCGGTTATCCAAAATCCACTGTAGAAGTGGTGAGATGTAAATGTATTTGGAGTTTCTCCCGAAAAGAACACAAGAAATTTAGACGTCTAATCTCTTCTCTTACCATTGACCGTAATATATTAGAAACATACCTATCAAGTATTGAGGATATTGTGATTAATTCTCTTGAAGAAATTTCTAGTATGAGCCAGCCGGTTGAGTTTTTAAAAGAGATGAAAAATATTTCTTTTAATATTATCATCGATATTTTCATGGGCTCTTACAATCAACATATTATTGCCAAAATCGGAGATTCATTCACCGAAATGCATAGTGCTTTGTTCTCTTTGCCCGTTAATCTTCTTGGTTTTGCTTTTCGTAAAGGAATCAAGGAGGAGCAAGAGGAAATCATGAAGACAAGACTTCCCAACCAGAAACATTTAAGTCTTAAGGATATCAAGAAAATGAATTATCTTTCTCAGATAATCAATGAAACACTGCGACTTAAGAATAGCAACTTTGCAATTTTTCGGGAGGCAACTATAGACGTTAACATTAACGGTTATACTATACCAAAAGGATGGAAAGTGTTAACTTGGTCGAGAGCTATTCATATGAATCCCATATATTATCCAAATCCAAATGAATTTAATCCATCAAGATGGAATGATCACAATATTAAAATTGGAAGTTTCCTTCCTTTTGGTGCTGGAAGTAGACATTGTCCTGGAAGTGATTTGGCTAAAATTGAAATTTCCATATTTTTACATTATTTCCTTCTCAATTATAAGCTTGAGTTAGTGAATCCAAAATGTCCTATTACTAGTTTACCATCACCCAAGCCTATAGACAATTGCCTTGCTAAGGTGATAAAGGTCTCAAGAATTGCATAG 1215 0.3424 MDIQYWVWTYALLLATYFCMFNFVWRLNEWYYSIKLRKKQYTLPPGDLGWPFVGNMLAFIKHFKSGHPDLFINNLVSKYGQNGIYKMHLFGNPSIIICEAEMCKRVLTDDETFKIGYPKSTVEVVRCKCIWSFSRKEHKKFRRLISSLTIDRNILETYLSSIEDIVINSLEEISSMSQPVEFLKEMKNISFNIIIDIFMGSYNQHIIAKIGDSFTEMHSALFSLPVNLLGFAFRKGIKEEQEEIMKTRLPNQKHLSLKDIKKMNYLSQIINETLRLKNSNFAIFREATIDVNINGYTIPKGWKVLTWSRAIHMNPIYYPNPNEFNPSRWNDHNIKIGSFLPFGAGSRHCPGSDLAKIEISIFLHYFLLNYKLELVNPKCPITSLPSPKPIDNCLAKVIKVSRIA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04412 404 Gene3D Cytochrome P450 33 250 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PRINTS E-class P450 group I signature 307 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PRINTS E-class P450 group I signature 339 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PRINTS E-class P450 group I signature 349 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PANTHER CYTOCHROME P450 26 241 385 - -
Vivi4g04412 404 Pfam Cytochrome P450 240 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 Pfam Cytochrome P450 44 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 Gene3D Cytochrome P450 251 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PRINTS P450 superfamily signature 268 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 PRINTS P450 superfamily signature 340 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04412 404 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 342 351 IPR017972 GO:0005506|GO:0016705
Vivi4g04412 404 SUPERFAMILY Cytochrome P450 37 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04412 Vivi-Chr4 170856946 170859636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04412 238 400 Cytochrome P450 AT2G32440 57.055 4.13e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04412 K04123 - cave:132162420 399.438