Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04411 ATGGATATACAATATTGGGTTTGGACTTATGCCCTTTTGTTAGCAACCTATTTTTGTATGTTCAATTTTGTGTGGAGATTGAATGAGTGGTATTATAGTATAAAATTAAGAAAGAAACAATACACTCTGCCTCCTGGTGATTTGGGATGGCCTTTTGTAGGAAATATGCTGGCCTTTATTAAACATTTCAAATCTGGTCATCCTGATTTGTTCATCAACAACCTTGTCTCCAAGTATGGACAAAACGGTATCTATAAGATGCACTTATTTGGAAATCCAAGCATCATTATTTGTGAGGCGGAGATGTGTAAAAGGGTTTTGACAGATGATGAGACCTTTAAAATCGGTTATCCAAAATCCACTGTAGAAGTGGTGAGATGTAAATGTATTTGGAGTTTCTCCCGAAAAGAACACAAGAAATTTAGACGTCTAATCTCTTCTCTTACCATTGACCGTAATATATTAGAAACATACCTATCAAGTATTGAGGATATTGTGATTAATTCTCTTGAAGAAATTTCTAGTATGAGCCAGCCGGTTGAGTTTTTAAAAGAGATGAAAAATATTTCTTTTAATATTATCATCGATATTTTCATGGGCTCTTACAATCAACATATTATTGCCAAAATCGGAGATTCATTCACCGAAATGCATAGTGCTTTGTTCTCTTTGCCCGTTAATCTTCTTGGTTTTGCTTTTCGTAAAGGAATCAAGGCACGCGAGAAGTTGGTGAAATTAGTTAAACCTATTGTTGAAGAAAGGAGGATGATGATAAAACATGGTGAGAGGAAAGATCTACTTGATGTGTTTTTGGATGCAAAGGATGAAGATGGTTGGAAACCAGAAGATGAGGATATTATTGACATATTGATAGGGATTGTACTTGCTGGCCATGAAAGTACAGCAAATAGTATGATGTGGTCAATGATATATCTTACACAAAATCCACATATTTTGGAAAAAGCCAAGATAATCAATGAAACACTGCGACTTAAGAATAGCAACTTTGCAATTTTTCGGGAGGCAACTATAGACGTTAACATTAACGGTTATACTATACCAAAAGGATGGAAAGTGTTAACTTGGTCGAGAGCTATTCATATGAATCCCATATATTATCCAAATCCAAATGAATTTAATCCATCAAGATGGAATGATCACAATATTAAAATTGGAAGTTTCCTTCCTTTTGGTGCTGGAAGTAGACATTGTCCTGGAAGTGATTTGGCTAAAATTGAAATTTCCATATTTTTACATTATTTCCTTCTCAATTATAAGCTTGAGTTAGTGAATCCAAAATGTCCTATTACTAGTTTACCATCACCCAAGCCTATAGACAATTGCCTTGCTAAGGTGATAAAGGTCTCAAGAATTGCATAG 1380 0.3457 MDIQYWVWTYALLLATYFCMFNFVWRLNEWYYSIKLRKKQYTLPPGDLGWPFVGNMLAFIKHFKSGHPDLFINNLVSKYGQNGIYKMHLFGNPSIIICEAEMCKRVLTDDETFKIGYPKSTVEVVRCKCIWSFSRKEHKKFRRLISSLTIDRNILETYLSSIEDIVINSLEEISSMSQPVEFLKEMKNISFNIIIDIFMGSYNQHIIAKIGDSFTEMHSALFSLPVNLLGFAFRKGIKAREKLVKLVKPIVEERRMMIKHGERKDLLDVFLDAKDEDGWKPEDEDIIDILIGIVLAGHESTANSMMWSMIYLTQNPHILEKAKIINETLRLKNSNFAIFREATIDVNINGYTIPKGWKVLTWSRAIHMNPIYYPNPNEFNPSRWNDHNIKIGSFLPFGAGSRHCPGSDLAKIEISIFLHYFLLNYKLELVNPKCPITSLPSPKPIDNCLAKVIKVSRIA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04411 459 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 Gene3D Cytochrome P450 33 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Vivi4g04411 459 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS E-class P450 group I signature 362 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 PANTHER CYTOCHROME P450 26 39 322 - -
Vivi4g04411 459 Pfam Cytochrome P450 44 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 Pfam Cytochrome P450 323 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04411 459 SUPERFAMILY Cytochrome P450 37 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04411 Vivi-Chr4 170856946 170859636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04411 7 452 Cytochrome P450 AT1G05160 41.875 6.17e-143 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04411 K04123 K17875 ag:BAG68929 590.497