Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04407 ATGGATACACAATATTGGCTCTGGTTATCTGCCATTTCACTAGTAAGTTATTTTTGTGTAAACACTTTAGCATGGAGAATGCATGATTTGTATTACAATCTCAAACAAAGAAACAAAGAGTACCCTCTTCCTCCTGGTGATTTGGGATGGCCATTTATTGGCAATATGTTGACCTTTCTTAAACACTTCTCATCTGGTCATCCTGATTTATTCATCAACAACATCGTTTCCAAGCATGGACGAAACGGTATCTACAAGACTCATTTGTTTGGAAACCCAAGCATCATAGTTTCTGAGGCTGAAATGTGTAAACGAGTGTTGACAGATGATGAGAAATTTAAAACCGGTTATCCAAAATCCACTATAGAAGTAGTGAGATGTAAATCTATATGGAGTTTCTCTAAAGAAGAACACAGACGTTTTAGACGCTTAATCTCGTCTCTTACCATGGGACATAGTACATTAGAAACGTATTTAACACGCATTGATGACATTGTGATTAATTCTTTGGAGGAACTTTCTAGTATGAGCCACCCGGTTGAGTTTTTGAAAGAGACGAAAACTATTTCTTTTAATATCATTATTGATATTATCTTAGGCTCTTACAATCAACATATAATAAATAAAATCGGAAATTCTTTTACCGAAATGTATACTGCTTTGTTCTCTATGCCCATTAATCTTCCCGGTTTTGCTTATCGGAAAGGACTCGTGGCACGTGAGAAGCTGGGGAAATTAGTTAAACCTATTGTGGAAGAAAGGAGATTGATGATAAAAAAAGGTGAAAGAAAAGATTTACTTGATGTTCTTTTGCAAGCAAAGGATGAAGATGGTTGGAAACCAGAAGATGAGGATATTATTGACATATTGATAGGGATTGTACTTGCTGGCCATGAAGCTACAGCCAGTGGTATGATGTGGTCAATGGTATATCTTACACAAAATCCACATACTTTGGAAAAGGCCAAGAAGGAGCAGGAAGAAATCATGAAGACCAGATTGCCTACGCAGAAACATTTAACTCTTAAAGATATAAAGAAAATGAATTATCTTTCTCAAGTAATCAATGAAATGATGCGCCTTACTAGTATGAACTTTGCAATTTTTCGAGAGGCAACAAGTGACGTTAACATCAATGGTTATACTATACCGAAAGGATGGAAAGTGTTAACTTGGATAAGAGCTATACATATGAATCCTACATATTATCCAAATCCAGAACAATTCAATCCATCTAGATGGAATGATCACAATACTAAAGTTGGAAGCTTCCTTCCTTTTGGAGCTGGAAGTAGATATTGTCCTGGAAGTGATTTGGCTAAAATTGAAATTTCTATATTTCTACATTATTTCCTTCTTAATTATAAGCTTGAGCTAGTAAATCCAAAATGTCCTATTACTAGTTTACCATCACCCAAGCCCACAGATAATTGCCTTGCTAAGGTGATAAAGAATGCATAA 1461 0.3546 MDTQYWLWLSAISLVSYFCVNTLAWRMHDLYYNLKQRNKEYPLPPGDLGWPFIGNMLTFLKHFSSGHPDLFINNIVSKHGRNGIYKTHLFGNPSIIVSEAEMCKRVLTDDEKFKTGYPKSTIEVVRCKSIWSFSKEEHRRFRRLISSLTMGHSTLETYLTRIDDIVINSLEELSSMSHPVEFLKETKTISFNIIIDIILGSYNQHIINKIGNSFTEMYTALFSMPINLPGFAYRKGLVAREKLGKLVKPIVEERRLMIKKGERKDLLDVLLQAKDEDGWKPEDEDIIDILIGIVLAGHEATASGMMWSMVYLTQNPHTLEKAKKEQEEIMKTRLPTQKHLTLKDIKKMNYLSQVINEMMRLTSMNFAIFREATSDVNINGYTIPKGWKVLTWIRAIHMNPTYYPNPEQFNPSRWNDHNTKVGSFLPFGAGSRYCPGSDLAKIEISIFLHYFLLNYKLELVNPKCPITSLPSPKPTDNCLAKVIKNA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04407 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vivi4g04407 486 CDD CYP90-like 76 482 - -
Vivi4g04407 486 PANTHER CYTOCHROME P450 26 39 470 - -
Vivi4g04407 486 Pfam Cytochrome P450 44 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 Gene3D Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 SUPERFAMILY Cytochrome P450 39 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g04407 486 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04407 Vivi-Chr4 170829409 170832233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04407 30 482 Cytochrome P450 AT1G05160 47.702 3.33e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04407 K04123 K17875 ag:BAG68929 638.262