Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04393 ATGCTTCAAAACAACAACAGCAAAAACCCATCAATCTCACTACACAACACTCACGTCAAGCTTCTAGCCTTCGACCTCCTAACCCTAACCCCACCCTCCTCCCCAGACCAACCCTTCACCCGCAAATCAATCCCCATAACCCGCCTCGAAACCCTAGGAACCATCACCCTCCGCGATCACAAACCCTCTAAGTTCCTCCGTTTCGCAATCGACGACGGAACCGGTTGCATCCCCTGTATCCTCTGGCTTAACCACTTGACTTCCCCTCATCTCGCTCGCCGTCGTAGTCCGCAGGATCTTTGTCTGCTCGCTGACGCTGCTGCGAGATCTGCGGAGGTTGTGAAGGTTGGGGTTGTCGCTAGGGTTAGGGGGAGGGTTACGGCGTTTAAGGGGAGGGTTCAGGTTACTGTGACGGATGTTGTTGGTGAAAGGGATCCTAATGCGGAGATTTTGCATTGGGTTGATTGTGTTAAGTTGGCTCGTAATTGTTATAATCTTGTTACTTTTTCTTCTTCCTCTTAG 522 0.5115 MLQNNNSKNPSISLHNTHVKLLAFDLLTLTPPSSPDQPFTRKSIPITRLETLGTITLRDHKPSKFLRFAIDDGTGCIPCILWLNHLTSPHLARRRSPQDLCLLADAAARSAEVVKVGVVARVRGRVTAFKGRVQVTVTDVVGERDPNAEILHWVDCVKLARNCYNLVTFSSSS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04393 173 PANTHER REPLICATION PROTEIN A-RELATED 7 165 IPR040260 -
Vivi4g04393 173 Gene3D - 13 167 IPR012340 -
Vivi4g04393 173 Pfam OB-fold nucleic acid binding domain 53 140 IPR004365 GO:0003676
Vivi4g04393 173 SUPERFAMILY Nucleic acid-binding proteins 35 158 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04393 43 159 Core DNA Replication Machinery Family AT2G24490 25.641 4.26e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04393 K23312 - csin:114287844 204.912