Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04369 ATGTTAGCAATATCATCACCTTCTTTGTTCTCATCAATTGGATGGCCCTTTGAAGAGCCCATAAGCCATAACCAGCATCAAAATCACTTCTTCAGAGACACTTCTGATCAATTATTTCACTTTCATCATCAACTTGACCCCGAAAATAATTCAACTGATCCATCACAGGCTACTAGTAGCGACCTTAACATGGTGAAGAAGCTCGTTCATAACGCTAGTGAGCGCGATCGTCGCAAGAAGATCAATAATTTGTATTCTTCACTTCGTTCACTTCTTCCATTGTCCGATCAAATGAAGAAGTTGAGCATTCCATTAACAATTTCAAGAGTCTTGAAATACATACCGGAGTTACAGAAACATGTGGAAGGACTGATTAAGAGAAAGGAAGAGATCTTATTCAAACTCTCACCGAAACGAGATAATCATGAGGTGAAGAATCATGGTCACAACTCAGGTTTTGTGGTTTCAAGTTGTAGGCTCAATGATAGTGAAGTTAGTATTCAGATTTCATGTTACACTCTCCACATGGTTCCACTATCTGAGATCTTGTTCTATTTTGAAAATGATGGGTTTCTGCTTCTAAATGTTTCTTCCTCTGAGACATTTGGAGGAAGAGTCTTCTATAATTTGCATTACCAGATGGATAAAACAAAGAGATTAGAATCAGATGATATAAATGAGAAGCTCTTATCAATAATGGAGAAGGAGGGGAAGTTTCATGTCAATAAAAGTTAG 735 0.3741 MLAISSPSLFSSIGWPFEEPISHNQHQNHFFRDTSDQLFHFHHQLDPENNSTDPSQATSSDLNMVKKLVHNASERDRRKKINNLYSSLRSLLPLSDQMKKLSIPLTISRVLKYIPELQKHVEGLIKRKEEILFKLSPKRDNHEVKNHGHNSGFVVSSCRLNDSEVSIQISCYTLHMVPLSEILFYFENDGFLLLNVSSSETFGGRVFYNLHYQMDKTKRLESDDINEKLLSIMEKEGKFHVNKS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04369 244 SMART finulus 71 123 IPR011598 GO:0046983
Vivi4g04369 244 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 56 228 - -
Vivi4g04369 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 117 IPR011598 GO:0046983
Vivi4g04369 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 134 IPR036638 GO:0046983
Vivi4g04369 244 Pfam Helix-loop-helix DNA-binding domain 66 118 IPR011598 GO:0046983
Vivi4g04369 244 Gene3D - 57 149 IPR036638 GO:0046983
Vivi4g04369 244 FunFam Transcription factor ORG2 61 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04369 Vivi-Chr4 170289886 170291862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04369 7 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.732 1.11e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi4g04369 HLH 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04369 - - gmx:100803424 227.254