Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04338 ATGGGGAATTCTTGTGTTGGTCCTAGCATTTCGAAGAATGGTATTATTCAATCGTTTTCGGCTGCGATTTGGCGTACACACTTGCCTGAACATGAAGGATCAGTGTCTACTAGAGGTTCCGGGAATGATGCAGCGAATGATAATGAAGCCGAATCTCCGCTGCCTGTCCAGAACAAACCTCCGGAGCAGATAACTATTCCGAAACCGGAGACAAAACAGGATATGAAACAGGAGACGAAATCTGAGACTGAACCGGAAAAGGATAAGGATAAGAAGAAACAAAGGAAACCTTCTGTGAAGAGAAGTTCTAGTGCAGGACTTCGTGTTGATTCGGTGTTGCAGAGGGAAACTGGTAATTTCAAGGAGTTTTTTAGTCTAGGGAAGAAACTCGGGCAGGGTCAATTTGGGATAACGTTCTTGTGTATTGAGAAAGAAACCGGGCGTCAGTATGCTTGTAAATCTATTGCAAAGAGGAAGCTTGTAACTGATGACGATGTGGAGGATGTGAGAAGAGAAATTCAGATAATGCACCATTTGGCTGGACACGCTAATGTTATATCGATAAAAGGTGCTTATGAGGATGCAGTGGCTGTTCATGTTGTGATGGAATTGTGTGCAGGTGGTGAGCTTTTTGATCGGATTATTCAGCGTGGACATTATACTGAAAGAAAGGCGGCTGAACTTATTAGGACTATTGTTGGTGTTGTTGAAGCTTGTCATTCTCTTGGTGTGATGCATAGAGACCTTAAACCTGAGAATTTTCTATTTGTTAATCAGCAAGAGGATTCGCTACTCAAAACTATTGACTTTGGATTATCAGTGTTCTTTAAGCCAGGTGATACATTTATTGATGTGGTTGGTAGTCCATATTATGTTGCCCCAGAAGTTTTGAAAAAGCGTTACGGTCCTGAAGCAGACGTTTGGAGTGCTGGTGTTATCCTTTACATTCTTTTGAGTGGCGTACCTCCATTTTGGGCTGAAAACGAACAAGGCATATTCGAACAGGTTTTGCATGGTGATCTTGACTTCGCTTCAGATCCATGGCCTGCAATTTCTGACAGTGCAAAGGATTTAGTAAGGAAAATGCTTGTTCGTGACCCTAGAAGACGGATGACTGCATATCAAGTATTATGTCATCCTTGGGTTCAAGTTGATGGTGTAGCTCCTGACAAGCCACTTGATTCCGCCGTATTAAGTCGCTTGAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTATAGTCATTGCAGAGAGCTTATCAGAAGAAGAATTAGCTGGCTTAAAAGAAATGTTCAAGATGTTAGACACAGATAACAGTGGTCAAATTACTTTCGAAGAACTTAAAGTCGGTTTGAAAAAAGTTGGTGCAAATCTTAAGGAGTCTGAAATTTATGATCTAATGCAAGCGGCTGATATAGATAACAGTGGAACAATTGATTACGGCGAGTTCATTGCGGCAACATTGCATCTTAATAAAGTTGAAAGAGAAGATCATCTATTTGCAGCCTTTTCTTACTTTGATAAAGATGGAAGTGGCTATATTACTCAAGAAGAACTTCAACAAGCTTGCGATGAGTTTGGCATAAAAGATGTTGGCTTGGACGAGATAATCAAGGAAATTGATGAAGATAATGATGGGCGCATAGATTATAACGAGTTTGTGGCTATGATGCAGAAAGGAAATGTTCCTATGGTTGGTGGTAAGAAAGGCCTTGAAAATAACTTCAGCATTCGTTTCAAGGAAGCATTAAAACTGTAG 1767 0.4063 MGNSCVGPSISKNGIIQSFSAAIWRTHLPEHEGSVSTRGSGNDAANDNEAESPLPVQNKPPEQITIPKPETKQDMKQETKSETEPEKDKDKKKQRKPSVKRSSSAGLRVDSVLQRETGNFKEFFSLGKKLGQGQFGITFLCIEKETGRQYACKSIAKRKLVTDDDVEDVRREIQIMHHLAGHANVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELIRTIVGVVEACHSLGVMHRDLKPENFLFVNQQEDSLLKTIDFGLSVFFKPGDTFIDVVGSPYYVAPEVLKKRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLHGDLDFASDPWPAISDSAKDLVRKMLVRDPRRRMTAYQVLCHPWVQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSEEELAGLKEMFKMLDTDNSGQITFEELKVGLKKVGANLKESEIYDLMQAADIDNSGTIDYGEFIAATLHLNKVEREDHLFAAFSYFDKDGSGYITQEELQQACDEFGIKDVGLDEIIKEIDEDNDGRIDYNEFVAMMQKGNVPMVGGKKGLENNFSIRFKEALKL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04338 588 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Vivi4g04338 588 SMART serkin_6 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04338 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Vivi4g04338 588 MobiDBLite consensus disorder prediction 30 107 - -
Vivi4g04338 588 MobiDBLite consensus disorder prediction 69 93 - -
Vivi4g04338 588 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Vivi4g04338 588 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Vivi4g04338 588 Pfam EF-hand domain pair 430 490 IPR002048 GO:0005509
Vivi4g04338 588 Pfam EF-hand domain pair 500 561 IPR002048 GO:0005509
Vivi4g04338 588 CDD STKc_CAMK 123 381 - -
Vivi4g04338 588 PANTHER SERINE/THREONINE-PROTEIN KINASE 107 556 - -
Vivi4g04338 588 CDD EFh 501 561 IPR002048 GO:0005509
Vivi4g04338 588 ProSitePatterns Protein kinases ATP-binding region signature. 130 157 IPR017441 GO:0005524
Vivi4g04338 588 MobiDBLite consensus disorder prediction 33 53 - -
Vivi4g04338 588 SUPERFAMILY Protein kinase-like (PK-like) 124 383 IPR011009 -
Vivi4g04338 588 Pfam Protein kinase domain 125 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04338 588 Gene3D Transferase(Phosphotransferase) domain 1 210 406 - -
Vivi4g04338 588 FunFam Calcium-dependent protein kinase SK5 210 394 - -
Vivi4g04338 588 ProSiteProfiles Protein kinase domain profile. 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04338 588 SMART efh_1 535 563 IPR002048 GO:0005509
Vivi4g04338 588 SMART efh_1 465 493 IPR002048 GO:0005509
Vivi4g04338 588 SMART efh_1 429 457 IPR002048 GO:0005509
Vivi4g04338 588 SMART efh_1 501 529 IPR002048 GO:0005509
Vivi4g04338 588 ProSiteProfiles EF-hand calcium-binding domain profile. 536 566 IPR002048 GO:0005509
Vivi4g04338 588 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Vivi4g04338 588 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Vivi4g04338 588 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Vivi4g04338 588 Gene3D - 407 566 - -
Vivi4g04338 588 FunFam Calcium-dependent protein kinase 1 126 209 - -
Vivi4g04338 588 SUPERFAMILY EF-hand 422 562 IPR011992 -
Vivi4g04338 588 Gene3D Phosphorylase Kinase; domain 1 126 209 - -
Vivi4g04338 588 CDD EFh 430 489 IPR002048 GO:0005509
Vivi4g04338 588 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Vivi4g04338 588 FunFam Calcium-dependent protein kinase 1 390 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04338 Vivi-Chr4 170102757 170106164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04338 1 583 EF-hand Containing Proteins AT5G04870 74.346 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi4g04338 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04338 K13412 - gmx:100797449 966.066