Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04302 ATGGCTCTGGAAGTTATTGCTGGACCTTTCATGGGAGCTGTTTTCAATGTGTTGCTTGAAAGGATAGCTTCCTCTGAGGTGGTAAACTTCTTCAAGAAGAATAAAAGTGAGAGTTTGCTGAAAAGATTGAAGATCATTTTGCTGTCAGTCCATGCTGTGCTCAATGATGCAGAAGAAAAGCAAATGAAAAATGAAGCTGTGAAGGAATGGCTTGAGGAACTTAAAGATGTGGCTTTTGATGCTGATGATTTACTTGATGAGATCTTTACTACTGAAAAAATGAAGCCAAAAGAGGTAAACATGTTTCATTCTCCTACAACAGTTTTTCATGATAAAGAGGTTGAACACAAGATAGAAGATGTTTATGAAAGATTAGAGTTTGTTATAAAATTGAAAGAGTTACTTGATTTGAAGGTTGGTAAGGAAATGAAAGTGACACATAAGTCACCAACTTCATCTGTGGTTGAAGCTTGTGATGTGTATGGAAGGGATAATGATAAAGATGTATTAGTTAAGTTGTTATTGTCGTCACATGATGTTGATGATGAGAAACTTGGTGTCATTCCCATTGTTGGTATGGGAGGGATTGGAAAAACTACCTTAGCTCAATTAGTATATAATGATGAAAGGGTACAGAAGGAGTTTGATCTCAAAGCCTGGATTTATGTTTCTGAAGAATTTGATATCTGCAAGATTACAAAGAATCTTTTGGAGGTTGTCACTTTGTGTAGCTGTGATGTCGAGGACTTGAATTCGCTTCAGCGGAATCTGAAAATGTATATACAGAAGAAAAAGTTTTTGTTTGTTTTGGATGATGTTTGGGACGAAAACTATGAGAACTGGGATAAGTTCAGGAGTCCGTTTAAACACGGAGGGGCTAACGGAAGTAAGATTATTGTAACAACTCGAAGTGGGAATGTTGCGTCGATAATGCAGACTTTTCCGCCTTATAATCTAACTGAATTGTCCAATGAAGATTGTTGGGAGCTCTTTTCAAACCATGCTTTTGGTAATAGCCATAAGGATTCAGATGTTCGTCGAAGTGTGGAAAGAGTAGGAAGAGAAATAGTTAGAAAGTGCAAAGGATTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGGTCAAAAAGTGATACACAAGAATGGCATAAAGTACTCAACAGTGAGATATGGGATCTACAAGAACATGAAAGTCATATTCTTCCAGCTTTGAGATTAAGTTACCACTATCTCCCTTCTCATTTAAAGAGATGTTTCGCTTATTGTGCGATTTTTCCGAAAGATTACGAATTTGAAAAGGAGAAGCTAGTTTTGTTGTGGATGGCAGAAGGGTTGCTACACCAGTCAAAAAGACATAGAAGAATTGAAGAAGTTGGGGATGAGTATTTTTGTGAATTAGTATCCAGATCGTTTTTCTACCAATCGAGAAGTGGAAAGTCATGTTTCCTAATGCATCATCTTATAAATGACTTGGCTCAATTTGTATCTGGAACATTTTCTGTGAGAATAGAAGATAACAACTCTGATCAAGTAATGGAAAGAACTCATTATTTGTCTCACATTATTTCACATTGTTCCTCCTATGTAAACCTGAAAGATGTTGGCAAAGCGAATCGCCTACGTACTTTTATGCAAATAAGAACAATAGGTACATCCATAGATTTGTTCAATGACATGCCAAATGATCTGTTGACAAAGTTAAGGTACTTGAGGGTGTTAACCTTGGTAGGTGCTTATTTCTATAGTTTACCTGATTCAATAGGTGAACTAAAACACCTGCGCTCTCTAGAAGTGTCCGACACTGAGATTATAAAGTTACCTGACTCCATCTGCAGTTTGTACGATTTACAAACACTCAAGCTAGTTGGATGTTATAATCTTAAAGAATTGCCAAAAGATATTCATAAACTTGTCAATTTGCGATACTTGGATATTACAGGCACTTGTTTGAAGTGGATGCCATTGCAAATCAGTGAATTGAAAAACCTCCAAAAGTTGAGTGACTTTTTTGTTGGTGAAAATCACGGATCTTCCATTAGTGAACTGGGAGAGCTATGCAGTTTACATGGATCATTGTTCATTCATGGCATTGAACACATTGTCGCTTATAAGGATTCTGAGGAGGCAAAATTGAAGGAAAAGCATGGCCTTGAAAAACTGTCTTTGGATTGGGGTGGAGACGGTGATACCGATAACTCACAGCATGAAAAGACCATATTGGACAGCCTTCACCCACACACAAATTTGAAGGAGCTTGAAATCTATGACTATCCAGGCACAGAATTTCCAGATTGGTTAGGGGACTACTACTTTTGCAACATGGTTTCCTTAAAGCTTAAAGGATGTAAATACTGCTACAAATTGCCTCCACTAGGACAACTTCCAATGTTGAAAGAGCTTCAGATTATTAAATTTGGAGGAGTAATGAATGTAGGATCCGAGTTTTACGGAAATAGAACTTCTGTCAGTACTGATTTCTTTCCTGCACTAGAAATTCTAAGGATCGAGTCTCTGTCAACATGGGAGAATTGGTGTCCTGATGCAGACAATTTAGGCACCAGAGCTTTCTGTCATCTTAGAGAGTTTTATATCGAAAACTGTCCCAAACTGACCGGGAATTTACCGAGTAGTCTTCCGTCTTTGACATTACTTGTTATCAGAGATTGCAAACGTTTGCTTTGTCCACTTCCCAAATCTCCGAGTCTGCGCGTGCTCAACATTCAGAATTGTCAAAAACTAGAATTCCCTGTGCATGCGCCTTGGTACCACCAATCACTTACATCTTTGTACTTGATCGATAGCTGTGACTCACTCATGTTCTTGCCATTGGATCTTTTCCCAAACCTTAAGTCTCTTGATATTTGGGGATGCAAAAATCTGGAAGCACTCACTATTGTTTCAGCATCAGATGCTACTCCTCCAAATTTCAAATCCCTTAACTCCATGTGCATAAGGCATTGTCCAAATTTCACATCTTTTCCTAAGGGAGGATTTGCAGCCCCAAAGCTTAACTTGTTAACCATCAACTACTGTCAGAAGTTGAATTCCCTGCCGGAAAATTTGCACGAGATTATGCCAAGCTTGAAAGAACTTCAACTAAGAGGTTGTCCACAAATTCAGGCATCTACCATGAGGCCACTAAGGATTCGGATTAGCAACAAATTCATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCAAGGTTGGAAGGTCTAATATCTGTTCACAGTCCCTCATCAAGTTAA 3252 0.3841 MALEVIAGPFMGAVFNVLLERIASSEVVNFFKKNKSESLLKRLKIILLSVHAVLNDAEEKQMKNEAVKEWLEELKDVAFDADDLLDEIFTTEKMKPKEVNMFHSPTTVFHDKEVEHKIEDVYERLEFVIKLKELLDLKVGKEMKVTHKSPTSSVVEACDVYGRDNDKDVLVKLLLSSHDVDDEKLGVIPIVGMGGIGKTTLAQLVYNDERVQKEFDLKAWIYVSEEFDICKITKNLLEVVTLCSCDVEDLNSLQRNLKMYIQKKKFLFVLDDVWDENYENWDKFRSPFKHGGANGSKIIVTTRSGNVASIMQTFPPYNLTELSNEDCWELFSNHAFGNSHKDSDVRRSVERVGREIVRKCKGLPLAVKTLAGLLRSKSDTQEWHKVLNSEIWDLQEHESHILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKEKLVLLWMAEGLLHQSKRHRRIEEVGDEYFCELVSRSFFYQSRSGKSCFLMHHLINDLAQFVSGTFSVRIEDNNSDQVMERTHYLSHIISHCSSYVNLKDVGKANRLRTFMQIRTIGTSIDLFNDMPNDLLTKLRYLRVLTLVGAYFYSLPDSIGELKHLRSLEVSDTEIIKLPDSICSLYDLQTLKLVGCYNLKELPKDIHKLVNLRYLDITGTCLKWMPLQISELKNLQKLSDFFVGENHGSSISELGELCSLHGSLFIHGIEHIVAYKDSEEAKLKEKHGLEKLSLDWGGDGDTDNSQHEKTILDSLHPHTNLKELEIYDYPGTEFPDWLGDYYFCNMVSLKLKGCKYCYKLPPLGQLPMLKELQIIKFGGVMNVGSEFYGNRTSVSTDFFPALEILRIESLSTWENWCPDADNLGTRAFCHLREFYIENCPKLTGNLPSSLPSLTLLVIRDCKRLLCPLPKSPSLRVLNIQNCQKLEFPVHAPWYHQSLTSLYLIDSCDSLMFLPLDLFPNLKSLDIWGCKNLEALTIVSASDATPPNFKSLNSMCIRHCPNFTSFPKGGFAAPKLNLLTINYCQKLNSLPENLHEIMPSLKELQLRGCPQIQASTMRPLRIRISNKFMEGKQNHSDPLFARLEGLISVHSPSSS 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04302 1083 Pfam Rx N-terminal domain 10 97 IPR041118 -
Vivi4g04302 1083 Gene3D - 408 495 IPR036388 -
Vivi4g04302 1083 FunFam Probable disease resistance protein At1g63360 409 495 - -
Vivi4g04302 1083 Pfam NB-ARC domain 181 389 IPR002182 GO:0043531
Vivi4g04302 1083 SUPERFAMILY L domain-like 541 1039 - -
Vivi4g04302 1083 Gene3D - 141 314 IPR027417 -
Vivi4g04302 1083 Gene3D - 321 407 IPR042197 -
Vivi4g04302 1083 Gene3D - 13 128 - -
Vivi4g04302 1083 Gene3D Ribonuclease Inhibitor 891 1055 IPR032675 -
Vivi4g04302 1083 PANTHER DISEASE RESISTANCE PROTEIN RP 41 952 IPR044974 GO:0006952
Vivi4g04302 1083 Gene3D Ribonuclease Inhibitor 536 890 IPR032675 -
Vivi4g04302 1083 FunFam Probable disease resistance protein At1g61300 144 314 - -
Vivi4g04302 1083 PRINTS Disease resistance protein signature 360 374 - -
Vivi4g04302 1083 PRINTS Disease resistance protein signature 945 961 - -
Vivi4g04302 1083 PRINTS Disease resistance protein signature 260 274 - -
Vivi4g04302 1083 PRINTS Disease resistance protein signature 187 202 - -
Vivi4g04302 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 423 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04302 Vivi-Chr4 169548637 169552953 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04302 571 680 WRKY Transcription Factor Family AT4G12020 33.333 1.46e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04302 - - vum:124831962 1641.71