Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04290 ATGGGAAAGAGAGTTAGGGATAAAGAGAGTGGAATTTCTAATGGAATGAATGGCCATCATACTCATCCAGGAAGAGTATGGGGAATTCTTCATATAATCAAGTATCATCATTGGCGTCATGTTAAGAGAAGGATTACACATAGGAGGCCTTGTAATCATGATTCAAGAAATGAAATTCCAGGAACTTCTGATGATTCTAGGGATGATGATATGAGAGAGCATTTGAGGCCAAATACAACTTTATCCAATGTTGAAGAAAATAAGCTGGTACAAACCACTCCACAAAACAAACAATCAATAAAATCAAAAATAAAAGCACTTCTTAATGAAGACACATACAAAATGAGAGGGAGACACAAGAGAAGCTCAACCTGTCCTACGAAATCGCAGCTAACTCGCATCGATTCAGTTCATCACTTGGAAGTTGATCCACTGAGTGAAATGCTGCTAACTGTTGAGAATCCAGAACCAGTTCTAGAAACATTTCAAAACCATCTTGCTGCAGGAACATTGGAAGTTCTGTCACCGGTTTTCTCAGGTAGGAAAAACTCAATCACCAACAATAGTACCAATGACAAATGTGTTGAATGTGGTGCAGTGTTTTCTAGTGACCCTTTGGAGAAACACAATGACAAGATTCATCATAAGCATCGCAATCTTTCGATTAGCGAAGGCGTGCAAGAAGATAAACTGATAAAAGCGAAAATACTTACCACCGATGCTTCGCCGCTTCTTTTCAAGGACTTTCTTGATGCTCTTGATTTAATCAACACAAACAAAGACTTTCTGTTGAAATATATAAATGATCCTGGTTCTCCTTTGCCATTTGAGCTTCATACTCAACCACATTCTCCCAATGGTAAATCGAGACGAGCCAAATCGATTTCATTACCTGTTAATGGATCATCTTCTGGAACCAAAGATTCTGAGCACATTGTAGATGAATGGTTCAATACAAAAGGACAGGTAGAATCAGAAATTCCAAATTTAGCAGATTTTCATAGGCCATCAACTTCTTCTTCACATAAACCTGATCATCATCAACTACTCGGTCCGGATCAAGAATCGGTTGAAAGAGATCATAACAACGAAACTCCCTCAGTTTCAAACAATGTGAAGAATAAGAACTTCAAGGATCTTAGAAAGAAGATAAAGCATATAATCGAAGAAAGCAAAAACGAAAAGCTTCGCATTACTATGGACGCTGTAGTCGATAAAATTCCCCGTGGTAACAAGTTTTCGAAAAATGTAAGGAAGTTGATGAACCATGAGAAATTCAAACAGCACAATAACCGTCAACTATCAGGCATGAGGACATCATCTCTCAAAGAATCGGTCAATCGATACTCTCAGCTTTACGACACTTGTTTTCACAATGAAGTAGTTAGCAATAAGGAAGAGAAGCCTCCTAAAACTGAGACCTTAAAACTGAAAACAGAAGAGAAAAGTTCAGTACTGCAGACACCGAAATCGTTTAAGAGGTTTCTTTCATTACCTAATCTAAAATCTTACTTCAACCAAAATGAGGAGTCTTCTGTTCAGTTATCTCCTCAGAATTCAGTTAGAAAATCTGAAGATAGAACTAGAAGCTCGAGTACACTTGATGGCTACTCAAATAATCATATTTTCTCACCTTCGCCTTCTGATCATACAAATGAAGAAAGCATTATGAAAGACGAACGAACACATGTTATCGTTAAGAGTGCTTCGGATTCAGGTTCAGATGTTAATGATGAGGTAAAGTCAGAAAAGAGTATAGGATTTGATGGTTTAGGAAATATGAGAGACAGTGAATTTTGTGGTAGCAATGAACATGACATTGGTTATACAACAGAATCAAGTACTATGTTGGTTGAAGCAAACTCAGCTTTCTCTTCTGATACAAGCTTCTTAGATTGTACATTTGAGTTGGAAAACTTAAATATATTAGAAGAATCAGATCAAGAGTTAAGGCCAATGCTAGCTGGTGAGGAATTGAACTATATGTATGAGGAACAAGAATCAAAAATAGACCAATATGAGGAGGTTGAGAATTTTCTTAAACATGGATATAAAATTCCATGCAACGAAATTGATACGAGTAACGAAGCCGCGTTTAATTACGTAAAGAAAGTTTTAGACCTCTCAGGTTTCACTAGCAATGAATCTCTTGATACATGGTATTCTGATAAGCAACCACTTGATCCATCGATTTACGAAGAATTAGAGGGATGTTTGCTTCTTGATCCTGATTGTTCTGGCAACTGTGAAGGTGGACATTGCAATCATCTTCTTTTGTTTGATATAATCAATGAAGGGTTGTTGGAGATTTTCGGTCGATCGTATAACTATTATCCTAGACCTTTATCTTCTCTGTCTTATGTTCATCGATTGCCAAATGGAAGAGATGATGTTCTGTATAAAGTATGGAAACTTATTACTTGGTATCTGAGTTCAGCTCCTGATGAGGCTTATCAATCATTGGATTACTATGTTAGTAAAGATCTAGCAAGAAATGATGGGTGGATGAATCTTCAATTTGATTCTGAATGTGTTGGGCTTGAGATAGATGATTTGATTTTCGATGATCTCTTGGACGATATTATCTACTCTTAA 2595 0.3684 MGKRVRDKESGISNGMNGHHTHPGRVWGILHIIKYHHWRHVKRRITHRRPCNHDSRNEIPGTSDDSRDDDMREHLRPNTTLSNVEENKLVQTTPQNKQSIKSKIKALLNEDTYKMRGRHKRSSTCPTKSQLTRIDSVHHLEVDPLSEMLLTVENPEPVLETFQNHLAAGTLEVLSPVFSGRKNSITNNSTNDKCVECGAVFSSDPLEKHNDKIHHKHRNLSISEGVQEDKLIKAKILTTDASPLLFKDFLDALDLINTNKDFLLKYINDPGSPLPFELHTQPHSPNGKSRRAKSISLPVNGSSSGTKDSEHIVDEWFNTKGQVESEIPNLADFHRPSTSSSHKPDHHQLLGPDQESVERDHNNETPSVSNNVKNKNFKDLRKKIKHIIEESKNEKLRITMDAVVDKIPRGNKFSKNVRKLMNHEKFKQHNNRQLSGMRTSSLKESVNRYSQLYDTCFHNEVVSNKEEKPPKTETLKLKTEEKSSVLQTPKSFKRFLSLPNLKSYFNQNEESSVQLSPQNSVRKSEDRTRSSSTLDGYSNNHIFSPSPSDHTNEESIMKDERTHVIVKSASDSGSDVNDEVKSEKSIGFDGLGNMRDSEFCGSNEHDIGYTTESSTMLVEANSAFSSDTSFLDCTFELENLNILEESDQELRPMLAGEELNYMYEEQESKIDQYEEVENFLKHGYKIPCNEIDTSNEAAFNYVKKVLDLSGFTSNESLDTWYSDKQPLDPSIYEELEGCLLLDPDCSGNCEGGHCNHLLLFDIINEGLLEIFGRSYNYYPRPLSSLSYVHRLPNGRDDVLYKVWKLITWYLSSAPDEAYQSLDYYVSKDLARNDGWMNLQFDSECVGLEIDDLIFDDLLDDIIYS 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04290 864 Pfam Domain of unknown function (DUF4378) 699 860 IPR025486 -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 49 100 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 51 76 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 77 100 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 278 310 - -
Vivi4g04290 864 PANTHER PROTEIN TRM32 1 864 IPR044257 -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 463 483 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 282 307 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 338 362 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 332 372 - -
Vivi4g04290 864 Pfam Protein of unknown function (DUF3741) 230 272 IPR022212 -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 509 555 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 531 551 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 1 23 - -
Vivi4g04290 864 MobiDBLite consensus disorder prediction 463 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04290 Vivi-Chr4 169233059 169236658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04290 691 854 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 55.030 1.54e-54 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04290 - - vvo:131600233 1700.26