Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi4g04280 | ATGGAGGAGGATATGGAATTTGTTCCGATTGTTGATGTTCCTGATACCCCCGATAGATCAAATGTTAGAAACAATGATCGAAAATGTGTAGGTAATTGTGAGAACAGGGAGAGGGCTTTTCCTATTGATGGTGAAAAAAGTAACTGCAACAATTATATAATATTGTCCCCAGATAAACCTTATCCTTCTCAAAAGCCTTCCATGTTTAGGAGAGCCCAATCTGAGAAAGTTTTTGGACTTGGAACATCACGCTCTAGTGGAGCCGGGAAGATGGAGAAAGGGAAAACTCTAAGCTCTATGATTCCTTCTAAGTCATCTCACCATGGGAGCATTCCTGTTTTCGATTTGACTGAAGAGAATGGGCAGTTGCCACAGCCAAAGCTAGCTTTCTTACATCGTGGATCAAGAGATAACACAATTAAAGACAAGAAAGACTTGAAAGCAAGTATTGGTAACTCCTCGTTACCCTTAATCACTGATTCATCTGCCGCTACTGGAAAGTGTAAACTAGATAACAAAACACTTCCAGGTCCTCATCTATTTATGGACCGTGGCAAAAGCATTTCTCTGTCCAATGATTCTCAATCTCAATCTAAAGGTGAAAATCAACTTTCTTTGCCTCCTCGTTTGTCCACTGCTCCAGGGGGTAGAGGGCACAAGAGATTGGTACGAAATGGTTGCATTTCACCACAAAATATTGCAACAAGGGCAAAACAATCAGCTGAACAAAACCGCTCTGAAACCAATAATGTTGAACAGATCCGTACCGGGCATTCAGTTTCTAGTAATACAATGTCTCCAATTAGTGTTGATGATATTGTTGCTGAAGATAGAGACCGCGGTAGAGCGAAAGGAAAGGGGTTACTTATTCATCCTTCATCACACGGAGCTAATGCTGGAACTATTCACATCGATAGCAGCCCCGTGGTCAATCATGAAGAGGCCAGTGGTAGCCGTAATAAACCAAGAAATTCATTTGAAAACTGGGAGAGACAAGGTGGTTGGAGAACTACACGTAACAATCAACACTTGTATGGTGTGAATGGGCATCATTCAAGGAATAATTATAATGGTGAGAGATTTGTTCACAAACAGAATATGAACAGACTGGACAGAAGTGACACTGGGAGCAGTCAAAATGGTAAGCATATTTTTGGCTCTCTATCAGATCATACACCTCAACCTGCTTCGTTGATTAATCCAGATGTTGGTCAGTCAACTAGACCTAGTACTACCGCTGACTCGCTGACTAAAAGGCAAAGGAAACCTGAATCATCTTCTAGAAATCCTAATGTAGCATCTCATAACTCTGGAACTATATTCGTCAATTCATCTGGAGAATCATCAAGTTCATCCCGAAGTCGTGTCTTGGCTCCTGAAGTTGTTGAGTTGTTATCCATACCAAGTTTCACCAACGGACTTATTGAAGGTGAAAATGACAATGACAACAATAGTTCGGTTGCCCGGGCAATGCAATTAGAAGCAGATGAGATATTGGCACGCGAACTTCAAGAACAACTGTATAATGATGATTATTTTGAAAGCAGTTGGATTGATGAACATTTAGCACGGGAGCTGCAGGTTGATGAACATGTAGCACGGGAGCTGCAGGATGCAGGGGATCTTCTGCACACATCTACTGATAATCATCAGATACTTCATCCTACACGGATTTCGAGGGGAAATAGACAGCCTCGTTTACGACCTCATCAAAATCCTTCAAATAGGAGAACTTTGCCTCAAGTTCCTCTCTCTAATAGAGCCTCGCAGATTAGGAGCCGCATGACAACTAGATCGTCAAGACCTATCGTATCATCTAGAGGAAGAGGAAGACGCCCCCAGTTTCCCATAGATATGGACCTAGACATGAGACTTGATATATTGGAAGCATTAGAGGATGCAGTAGGGGATTTTAATGATATGGGAATGGCTGATAACATCCTTAATGGTCATCGTGATTTCAATGAAGATGATTATGAAATGCTACTGGCTCTTGATGATCAAAACCACCAGCATACTGGTGCATCTACCAATCTGATCAATAGCTTGCCTCAGTCCACCGTCCAGAATGACAACTTCACAGAGAACTGTGCCATATGTATCGAGACCCCTGTCAAAGGCGACATTATTCGCCACCTTCCTTGTTTGCATAAATTTCACAAAGACTGTATTGATCCTTGGCTTGGTAGGAAAAGGTTGTGCCCGGTCTGCAAGTCATCAATCACCTAG | 2229 | 0.4213 | MEEDMEFVPIVDVPDTPDRSNVRNNDRKCVGNCENRERAFPIDGEKSNCNNYIILSPDKPYPSQKPSMFRRAQSEKVFGLGTSRSSGAGKMEKGKTLSSMIPSKSSHHGSIPVFDLTEENGQLPQPKLAFLHRGSRDNTIKDKKDLKASIGNSSLPLITDSSAATGKCKLDNKTLPGPHLFMDRGKSISLSNDSQSQSKGENQLSLPPRLSTAPGGRGHKRLVRNGCISPQNIATRAKQSAEQNRSETNNVEQIRTGHSVSSNTMSPISVDDIVAEDRDRGRAKGKGLLIHPSSHGANAGTIHIDSSPVVNHEEASGSRNKPRNSFENWERQGGWRTTRNNQHLYGVNGHHSRNNYNGERFVHKQNMNRLDRSDTGSSQNGKHIFGSLSDHTPQPASLINPDVGQSTRPSTTADSLTKRQRKPESSSRNPNVASHNSGTIFVNSSGESSSSSRSRVLAPEVVELLSIPSFTNGLIEGENDNDNNSSVARAMQLEADEILARELQEQLYNDDYFESSWIDEHLARELQVDEHVARELQDAGDLLHTSTDNHQILHPTRISRGNRQPRLRPHQNPSNRRTLPQVPLSNRASQIRSRMTTRSSRPIVSSRGRGRRPQFPIDMDLDMRLDILEALEDAVGDFNDMGMADNILNGHRDFNEDDYEMLLALDDQNHQHTGASTNLINSLPQSTVQNDNFTENCAICIETPVKGDIIRHLPCLHKFHKDCIDPWLGRKRLCPVCKSSIT | 742 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 285 | 357 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 170 | 270 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 187 | 209 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 80 | 108 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 426 | 454 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 565 | 604 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 370 | 454 | - | - | |
Vivi4g04280 | 742 | ProSiteProfiles | Zinc finger RING-type profile. | 697 | 738 | IPR001841 | - | |
Vivi4g04280 | 742 | CDD | RING-H2_PA-TM-RING | 697 | 738 | - | - | |
Vivi4g04280 | 742 | SUPERFAMILY | RING/U-box | 684 | 741 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 371 | 414 | - | - | |
Vivi4g04280 | 742 | FunFam | RING/U-box superfamily protein | 662 | 742 | - | - | |
Vivi4g04280 | 742 | Pfam | Ring finger domain | 696 | 738 | IPR001841 | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 330 | 357 | - | - | |
Vivi4g04280 | 742 | PANTHER | SI:CH211-59O9.10 | 275 | 742 | - | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 545 | 615 | - | - | |
Vivi4g04280 | 742 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 663 | 742 | IPR013083 | - | |
Vivi4g04280 | 742 | MobiDBLite | consensus disorder prediction | 228 | 269 | - | - | |
Vivi4g04280 | 742 | SMART | ring_2 | 697 | 737 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi4g04280 | Vivi-Chr4 | 168964940 | 168972498 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi4g04280 | 8 | 742 | C3H Transcription Factor Family | AT1G04790 | 32.650 | 3.55e-83 | 275 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi4g04280 | 4 | 168964940 | 168972498 | Vivi4g04280 | 4 | 168964940 | 168972498 | ECH |