Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04278 ATGGCTCTCTTCAAGATTCATGATTCACCATCCTCACCTTCATCCTATCTCTCTTCTTCCATTACTACTAATGCTGATGGTCTTGGTTCTCTTTCTTGTAAACGGAAATGTCGACAACAAGAAACCAGCAACATTTCATCATTGTTGGATTTGTCTTCATATCCTAATGAAACCAATGTTTGTCTCCACCTATCTCTTTCTTTTTGTAATTGCATTCAAATTGCCAAGAAACAAAAACTTGCTCACCAAGAAACGAATGCTAATGCTGTTGGAACAAGTTCTGATTCTTCAACCAATGGCGATGATCCATGGAAAATCAGGAAGGTGCTCACAGCAAGTGATCTTGGCAACAATAGCAGACTTCTGTTGAAGAAAGAATTGGCTAAAAAATGGGTGGTTCCTTTTTTGGATAAAGATCCAGCTGAAAAAGATGGAGTGAAAGTTTCGGTGTTTGATGTTGACACTCAAGATCTCCGTTCTCTTGTTTTCAAGGTATGGCCTTCCAATGGAAGTCATGTTTTCAACGATACGTGGATCACTGATTTTGTAGATAAACGGAACTTAAAGGCTGGAGATGAAATTGGTCTTAAATGGGATAAAGAAGAGAAGAAATTTGATTTTTCTGTTCTTCGTAGGGGTTCATCACAGCAGATATAG 657 0.3836 MALFKIHDSPSSPSSYLSSSITTNADGLGSLSCKRKCRQQETSNISSLLDLSSYPNETNVCLHLSLSFCNCIQIAKKQKLAHQETNANAVGTSSDSSTNGDDPWKIRKVLTASDLGNNSRLLLKKELAKKWVVPFLDKDPAEKDGVKVSVFDVDTQDLRSLVFKVWPSNGSHVFNDTWITDFVDKRNLKAGDEIGLKWDKEEKKFDFSVLRRGSSQQI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04278 218 CDD B3_DNA 104 211 IPR003340 GO:0003677
Vivi4g04278 218 SUPERFAMILY DNA-binding pseudobarrel domain 101 213 IPR015300 -
Vivi4g04278 218 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 66 216 - -
Vivi4g04278 218 Gene3D - 101 216 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04278 Vivi-Chr4 168951401 168952057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04278 106 192 B3 DNA Binding Superfamily AT1G20600 34.091 2.87e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04278 - - psat:127081321 215.698