Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04265 ATGGCTCTCTCCAAGATTCATCTTTCACTTTCATCATCCCCATCTTCGTCTAATCTCTCTTCTTCCATTACTAATGATGCTGATCATCTTACACTTGGTTCTCCTTCTTTCCTAATTAGTACTGATACCGGTGATCTTGCTTCTCTTTCTTGTGGAACATACAAACGGAAATGCCGACAACAAGAAACCAACAACATTTCATCATTGTTGGATTTGTCTTCATATCCCAATGAAACCAATGTTTGTCTCCACCTATCTCTTTCTTTTTGTAATTGCATCCAAATTGCCAAGAAGCAGAAACTTGCTCTCCAAGAAACTAATCTTGATGCTGCTGGAACAAGTTCTGATTCTTCATCCAATAGTGATGATCCGTGGAAAATCAAGAAGGTGCTCACAGCAAGTGATCTTGGCAACAATAGCAGACTTTTGTTGAAGAAAGAACTGGCTAAAAAATGGGTGGTTCCTTTTGTGGATAAATTAGCTGAAGCTGAAAAAGATGGAGTCAAAGTTCCAGTGTTTGATGTTGACACTCAAAGTCTCCATTCTCTTGTTTTCAAGATATGGCCTTCCAATGGAAGCCATGTTTTTATCGATACATGGAACAAGGATTTTGTAGCTAAAAGGAACTTAAAGGCTGGAGATGAAATTGGTCTTAAATGGGATAAAGACAAGAAGAAATTTGTTTTTTCTGTTCTTTGTAGGGGTTCATCACAGCAGATATAG 723 0.3804 MALSKIHLSLSSSPSSSNLSSSITNDADHLTLGSPSFLISTDTGDLASLSCGTYKRKCRQQETNNISSLLDLSSYPNETNVCLHLSLSFCNCIQIAKKQKLALQETNLDAAGTSSDSSSNSDDPWKIKKVLTASDLGNNSRLLLKKELAKKWVVPFVDKLAEAEKDGVKVPVFDVDTQSLHSLVFKIWPSNGSHVFIDTWNKDFVAKRNLKAGDEIGLKWDKDKKKFVFSVLCRGSSQQI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04265 240 Gene3D - 118 236 IPR015300 -
Vivi4g04265 240 CDD B3_DNA 125 233 IPR003340 GO:0003677
Vivi4g04265 240 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 101 237 - -
Vivi4g04265 240 SUPERFAMILY DNA-binding pseudobarrel domain 122 234 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04265 Vivi-Chr4 168844477 168845199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04265 104 239 B3 DNA Binding Superfamily AT3G24650 29.139 1.19e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04265 - - psat:127081321 206.068