Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04264 ATGGCTCTCTTCAACATTCACGATTCACCATCCTCATCTTCATCATATCTCTCTTCTTCCATTACTACTAATGCTGCTGATCTTGATTCTCTTTCTTGTAAACGGAAATGTCGACAACAAGAAACCAGCAACATTTCATCATTGTTGGATTTGTCTTCATATCCCAATGAAACCAATGTGTGTCTCCACCTATCTCTATCCTTTTGTAATTGCATTCAAATTGCCAAGAAACTAAAACTTGCTCACCAAGAAACTAATCTTGATGCTGCGGGAACAAGTTCTGATTCTTCAACCAATGGTGCTGATCCATGGAAAATCAAGAAGGTGCTCACAGCAAGTGATCTTGGCAACAATAGCAGACTTTTGTTGAAGAAAGAATTGGCTAAAAAATGGGTGGTTCCTTTTGTGGATAAATTAGCTGAAGCTGAAAAAGATGGAGTCAAAGTTCCAGTGTTTGATGTTGACACTCAAAGTCTCCGTTCTCTTGTTTTCAAGATATGGCCTTCTAATGGAAGTCATGTTTTCATCGATACATGGATCAAGGATTTTGTAGCTGAAAGGAATTTAAAGGCTGGAGATGAAATTGGTCTTAAATGGGATGAAAACGAGAAGAAGTTTGATTTTTCTGTTCTTCGTAGGGGTTCATCACAGCAGATATAG 660 0.3818 MALFNIHDSPSSSSSYLSSSITTNAADLDSLSCKRKCRQQETSNISSLLDLSSYPNETNVCLHLSLSFCNCIQIAKKLKLAHQETNLDAAGTSSDSSTNGADPWKIKKVLTASDLGNNSRLLLKKELAKKWVVPFVDKLAEAEKDGVKVPVFDVDTQSLRSLVFKIWPSNGSHVFIDTWIKDFVAERNLKAGDEIGLKWDENEKKFDFSVLRRGSSQQI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04264 219 SMART B3_2 106 214 IPR003340 GO:0003677
Vivi4g04264 219 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 49 217 - -
Vivi4g04264 219 Gene3D - 103 217 IPR015300 -
Vivi4g04264 219 SUPERFAMILY DNA-binding pseudobarrel domain 103 214 IPR015300 -
Vivi4g04264 219 CDD B3_DNA 104 212 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04264 Vivi-Chr4 168813059 168813718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04264 83 195 B3 DNA Binding Superfamily AT3G24650 29.134 1.31e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04264 - - vvo:131659355 210.69