Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04263 ATGGCTCTCTTCAACATTCATGATTCACCATCCTCATCTTCATCATATCTCTCTTCTTCCATTACTACTAATGCTGCTGATCTTGATTCTCTTTCTTGTAAACGGAAATGTCGACAACAAGAAACCAGCAACATTTCATCATTGTTGGATTTGTCTTCATATCCCAATGAAACCAATGTGTGTCTCCACCTATCTCTATCCTTTTGTAATTGCATTCAAATTGCCAAGAAACTAAAACTTGCTCACCAAGAAACTAATCTTGATGCTGCGGGAACAAGTTCTGATTCTTCAACCAATGGTGCTGATCCATGGAAAATCAAGAAGGTGCTCACAGCAAGTGATCTTGGCAACAATAGCAGACTTTTGTTGAAGAAAGAATTGGCTAAAAAATGGGTGGTTCCTTTTGTGGATAAATTAGCTGAAGCTGAAAAAGATGGAGTCAAAGTTCCAGTGTTTGATGTTGACACTCAAAGTCTCCGTTCTCTTGTTTTCAAGATATGGCCTTCCAATGGAAGTCATGTTTTCATCGATACTTGGAACAAGGATTTTGTAGCTAAAAGGAACTTAAAGGCTGGAGATGAAATTGGTCTTAAATGGGATAAAAAAGAGAAGAAATTTGATTTTTCTGTTCTTCGTAGGGGTTGA 645 0.3767 MALFNIHDSPSSSSSYLSSSITTNAADLDSLSCKRKCRQQETSNISSLLDLSSYPNETNVCLHLSLSFCNCIQIAKKLKLAHQETNLDAAGTSSDSSTNGADPWKIKKVLTASDLGNNSRLLLKKELAKKWVVPFVDKLAEAEKDGVKVPVFDVDTQSLRSLVFKIWPSNGSHVFIDTWNKDFVAKRNLKAGDEIGLKWDKKEKKFDFSVLRRG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04263 214 Gene3D - 103 212 IPR015300 -
Vivi4g04263 214 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 49 213 - -
Vivi4g04263 214 SUPERFAMILY DNA-binding pseudobarrel domain 103 212 IPR015300 -
Vivi4g04263 214 SMART B3_2 106 214 IPR003340 GO:0003677
Vivi4g04263 214 CDD B3_DNA 104 212 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04263 Vivi-Chr4 168804196 168804840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04263 83 206 B3 DNA Binding Superfamily AT3G24650 28.986 1.91e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04263 - - vvo:131659355 207.608