Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04253 ATGTTTAGCTTTTACACTTCAAAAATCCTCAGGAGGTGCTTTCTTCTTCCCCTAAGCACCCCTGAGATTCATTTCAAAACCCTATTCATATTTTCATCTATTAACTTACAACAACCCAATTTCACTTTCCATTTCCCTTTCAATTTCTGTTCCATTTTCACCGTCGAATTTCAATGGCTTCCGAACGGTTTCACCGACAAGAACGCCGTGTTCAGAAAACTCAAAACCAAGTCCGAAAACAAGTCGTGTTTTGATTGTAATGCAAAGAATCCGACCTTGGCGTTAGTACCGTATGGGATCTTCCTCTGCATTGATTGCTCGACAGTTCATCGGAGTCTCGGCGTTCACATCAGCTTCGTGAGGTAA 366 0.418 MFSFYTSKILRRCFLLPLSTPEIHFKTLFIFSSINLQQPNFTFHFPFNFCSIFTVEFQWLPNGFTDKNAVFRKLKTKSENKSCFDCNAKNPTLALVPYGIFLCIDCSTVHRSLGVHISFVR 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04253 121 Gene3D Arf GTPase activating protein 62 121 IPR038508 -
Vivi4g04253 121 ProSiteProfiles ARF GTPase-activating proteins domain profile. 68 121 IPR001164 GO:0005096
Vivi4g04253 121 Pfam Putative GTPase activating protein for Arf 70 121 IPR001164 GO:0005096
Vivi4g04253 121 PRINTS HIV Rev interacting protein signature 80 99 IPR001164 GO:0005096
Vivi4g04253 121 PRINTS HIV Rev interacting protein signature 99 116 IPR001164 GO:0005096
Vivi4g04253 121 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 64 121 - -
Vivi4g04253 121 SUPERFAMILY ArfGap/RecO-like zinc finger 69 121 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04253 Vivi-Chr4 168578343 168580656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04253 71 120 C2H2 Transcription Factor Family AT4G21160 50.000 1.84e-11 57.8