Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04244 ATGGACCCTAATCAATATAATTTTCAACAATCTATGTTCCATCTCATGCAAAATCAGCAAAATTCTAATCCTCAAAATTCTCAATTTCCCTCGCCGTCAACAAACTCTACCGTATTTTTTCCGCCACCAAACAACCCAAATATTTATTTTAGACCACCGATAAATACTCATGGGATGAATTTTTCTCATAATGAACCCGAAACACCAAATGGGTTTATGTCTGAACGCCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAAATATTACAGTTAAAAAAGAACAAAGGCATCCAATTGTGGGAGTTGATCAAAAAGTCGATAGCTTTTGGTTAAGAATCACCGATAATTATAACCAATATCGTGGGCAGTCACGAGAAAAGCTACAAGGCCAATTAAAATCTCGATGGCATCGAATAAATGGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCGTGAAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGCGGCTTTTAAAAGATGAACCTAAATGGATGGGAGCATCCATTGAAAATTCTTCAAAGAGAACAAAGAATTCTGTTAGCGGTGCATACACGACATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATGCAACTGAACCTCGTTCTAGTGTTATTTCTGATACAATGAATAAAATAATGGAAGTAATGGAAAACCTTGCACGACTTAAGGAGGAAGGAAACAAATTAGTCAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAACGATAGTCAACGTGAATTTCATGAAAAACGTTGTAATAACCTAAAAGAAAAATATGGATGGTAA 993 0.3656 MDPNQYNFQQSMFHLMQNQQNSNPQNSQFPSPSTNSTVFFPPPNNPNIYFRPPINTHGMNFSHNEPETPNGFMSERQVPQFSTQVGIENITVKKEQRHPIVGVDQKVDSFWLRITDNYNQYRGQSREKLQGQLKSRWHRINGLVQKFVGCYKQAVREKKSGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKDEPKWMGASIENSSKRTKNSVSGAYTTSPNSETPSSYEFNSSSPMERPMGQKAAKRKGKAKENATEPRSSVISDTMNKIMEVMENLARLKEEGNKLVKEKMEFEAMQFIMSDTSKMNDSQREFHEKRCNNLKEKYGW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04244 330 MobiDBLite consensus disorder prediction 203 263 - -
Vivi4g04244 330 Coils Coil 265 299 - -
Vivi4g04244 330 MobiDBLite consensus disorder prediction 19 38 - -
Vivi4g04244 330 Pfam No apical meristem-associated C-terminal domain 182 319 IPR029466 -
Vivi4g04244 330 PANTHER - 63 326 - -
Vivi4g04244 330 MobiDBLite consensus disorder prediction 243 257 - -
Vivi4g04244 330 MobiDBLite consensus disorder prediction 203 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04244 Vivi-Chr4 168473200 168474276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04244 97 285 Glutathione S-transferase Gene Family AT5G41240 33.166 4.49e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04244 - - vvo:131607299 563.148