Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04235 ATGTACTATGTGTTCCTAAGTGGATTAGAAATGAATTCAGACACCATCTTAAGATCAAGGAAGAAAGGTACAAGCATAGCAATTGCTGGCATTGTGACACCAATGTTATTTGGTGTTGGATTTCTAGCTCTACAACAAAAACTACTAGATAGAAATGATGTTCTCATACAATTACGAAAAGAAATTCACGGCGAAGCATATTTATTCTGGTGTTTAGCACTTTCTGTAACAGGTTTCCCTGTCCTTGCAAGAATCTTAGCTAAGCTTAAACTTTTATATACAAAGCTTGGAAAAGATGCATTGACGGCCGCTATGTTAACTGATGCATATGGTTGGGTTATGTTCACATTGTTGATTCCTTATTCGAGTAGAGGTGGAAAGCCTTATCTCTCAGTAATCTCTACTTTGTTGTTCATAGTTTTTTGCTTTACTGTGGTGAGACCTATCCTTACTCCAATCATTGAACACAGAACAAGTACGGACACGTGGCGAAAATCACAATTGTTGGACGTGTTGATGGGATTATTTATTTGTTCGTATATTACAGATTGTCTCGGTACACATCCTATTGTTGGAGCTTTTGTCTTTGGATTAATTTTGCCTCATGGAAAATTTGCTGATATGGTTTTGGAAATGTCGGCTGATTTTGTTTCTGGGATTCTGTGTCCTGTTTACTTTGCTGGATTTGGTTTTAGGCTCAACTTGCCTTTCCTTTTGATGCATCATAATGCAGGCTTAATGTTGTTGATTATGCTTTTGTTATCCATACCTAAAGTATTGAGCTCTATGATTGTCACTTTCTTCTTCGGTATGCCTGCTCGAGATGGACTTGCCATCGGATTGCTTCTCAACACCAAGGGTATCATGGCTGTCATACTACTAAATGTTGCTTGGGACAAAAAGATTTTGGATCCATATACTTTCATGGTTATGATGCTTGCTATTATAGTAATGACTGTGATGGTCTCTCCTTTGATCAATGCAATATACAAACCAAAATTCCGATTCTTGCAATCCCAATTAAGGACCGTGCAAAAGCAGAGGTTCGACATGGAGCTTCGAATCGTCGCATGTGTCCACAATGCTAAACATGCAGATAACATGATCCATGTCATTGAAGCCACAAATGCTAGTAGAGTTTCACCTATACATGTCTCTGTAGCTCACCTAGTTAAACTCTCTAGACATGGCACAGCTATTCTTGTTCCACATATGGATCATTCAATCAGCACGGTAGGCGCAGAAGCAACCAACTATGGATCACAATTAGAATTAGAGTTTGAGAGCATAACTAATGCATTTGAAGAACTTGTAGAACAATACAACGCGGTTAGGTTTGACATATCAGGTGTTGTCTCGTCCTACACAACTATCCATGAGGACATTTTCAATATTGCCGAAGAGAAACGCGCGAGCCTAATTCTCCTCCCCTTTCACAAAGATTTCTCAACAGTAGAAGGTGCTCAGGAAATAATCCACAACGAACATTGTGAGATAAACAAAAATGTACTGCAACAAGCACCTTGTTCAGTAGGGATCTTCTTGGACCGCGGTTTAGGATCGTTGTTAGAAACAAAACTGCGCATTATAATGATTTTCATCGGTGGACCTGACGACCGTGAAGCCTTGTCTATTGCATGGAGAATGGCAGGGCATCCAGGAACCCGATTACATGTCGTGAGGATCAATTTGTTAGGTAAGGCCGCAGAAGAAACAAAATTAAAAATGGAAAAAAGCAAGTCTCGTCACGGAATGTTGTCGACTGTTATAGACAGTGCGATGCAAAAAGAGTTGGATGAAGAGTCTATAATTTCCTTCAGGCACAAGGCAGTGCACAATAATGATTCAATTGTTTACTCAGAGAAGGAAGTCCGTTCGAATACCGGCGAAGAGATTCCAACGCTTCTTAGCGAGATTGATAAACCTGGATATGACTTGTACATTGTTGGACAAGGGAGTGGTAAGAACTCGGTGATTTTTTCGAGGTTGTTGGAATGGTGTGACCATCCTGAACTTGGTGTTGTAGGTGACATATTGGCTTCAACAAGCTTTGGTTCGCAATCTTCTGTGCTTATTGTGCAGCAGTATATGATTGGGAGAAAAAGTGTTGTTAGAAAATGTCATGAAGTGAAAAATGGTACTGACAATTTGTAA 2154 0.3974 MYYVFLSGLEMNSDTILRSRKKGTSIAIAGIVTPMLFGVGFLALQQKLLDRNDVLIQLRKEIHGEAYLFWCLALSVTGFPVLARILAKLKLLYTKLGKDALTAAMLTDAYGWVMFTLLIPYSSRGGKPYLSVISTLLFIVFCFTVVRPILTPIIEHRTSTDTWRKSQLLDVLMGLFICSYITDCLGTHPIVGAFVFGLILPHGKFADMVLEMSADFVSGILCPVYFAGFGFRLNLPFLLMHHNAGLMLLIMLLLSIPKVLSSMIVTFFFGMPARDGLAIGLLLNTKGIMAVILLNVAWDKKILDPYTFMVMMLAIIVMTVMVSPLINAIYKPKFRFLQSQLRTVQKQRFDMELRIVACVHNAKHADNMIHVIEATNASRVSPIHVSVAHLVKLSRHGTAILVPHMDHSISTVGAEATNYGSQLELEFESITNAFEELVEQYNAVRFDISGVVSSYTTIHEDIFNIAEEKRASLILLPFHKDFSTVEGAQEIIHNEHCEINKNVLQQAPCSVGIFLDRGLGSLLETKLRIIMIFIGGPDDREALSIAWRMAGHPGTRLHVVRINLLGKAAEETKLKMEKSKSRHGMLSTVIDSAMQKELDEESIISFRHKAVHNNDSIVYSEKEVRSNTGEEIPTLLSEIDKPGYDLYIVGQGSGKNSVIFSRLLEWCDHPELGVVGDILASTSFGSQSSVLIVQQYMIGRKSVVRKCHEVKNGTDNL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04235 717 Pfam Sodium/hydrogen exchanger family 3 325 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi4g04235 717 Gene3D - 1 335 IPR038770 -
Vivi4g04235 717 PANTHER CATION/H + ANTIPORTER 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04235 Vivi-Chr4 168395942 168400943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04235 1 697 Antiporter Super Family AT2G13620 37.151 3.91e-152 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04235 - - psat:127095231 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04235 4 168395942 168400943 Vivi4g04235 4 168395942 168400943 ECH