Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04220 ATGTTAGCAAAGGCAATAGCTACTGAAGCTGGAACAAATTTTATCAATATTTCAACCTCCAGCATTATGTCCAAGGCGGACAGTTTGCTAGGGAGACGTGAGGGAGCAGATGATTCAAATTATGAAGCTAAGATAGTTTTTTTTGTCCGTTGGGACGGTCTCCGCACAAAAGAAAACAACCGTGTACTTGTCCTTGTCCTCACAAATAGGCTGTGGGATCTTGACGATGCTGTTTTAAGGAGCTCCCAAGAAGATTTGTATTCTAATTTATGGTCTTTCTTCAACATTATATACAAATTGCTAATTAATTTTCCGGATGCTTCAAACCGTGAAAATATATTTAAGATGATATTAGCTAGTGAGCATTTGTCGATAGATGTTAATCTAAAAGAACTGGCTAACAAAACCAGTGGTTACTCTGGAAGTGATCTCTAG 435 0.3793 MLAKAIATEAGTNFINISTSSIMSKADSLLGRREGADDSNYEAKIVFFVRWDGLRTKENNRVLVLVLTNRLWDLDDAVLRSSQEDLYSNLWSFFNIIYKLLINFPDASNRENIFKMILASEHLSIDVNLKELANKTSGYSGSDL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04220 144 Gene3D - 25 90 IPR027417 -
Vivi4g04220 144 Gene3D - 104 144 - -
Vivi4g04220 144 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 25 - -
Vivi4g04220 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 143 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04220 Vivi-Chr4 168217879 168218769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04220 1 144 Calmodulin-binding Proteins AT3G56690 29.545 1.63e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04220 - - vvo:131598277 278.1