Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04169 ATGGACATTTTAATTTCTGTTGTTGGAAAGGTAGCAGAGTATACTGTTGCTCCTATCGGACGTCAAGCTAGTTACTTGATATGCTACAAAGCCAATTTCAAAACGTTAGCTGATCATGTCAAAGATCTTGAAGATGAAAGAGAAAGAATGATGCGTTTGGTTGAAGAAGAGGAGAGAAAAGGTAAAACAATTTTTCAAGGTGTGGAGAGCTGGATTGAGAATGTGAAGGAGATCACTGAAAAAGCGAATCACCTTCAAAACGATCCTCGCCATGCCAATGTTAGGTGCTCAGCAGCATGGCCGTTTCCTAATTTGATTTCGCGTCATCAACTAAGTAGGAAAGCCACAAAAATTGCAAAAGATGTTGTTCAAGTTCAAGGAAAAAAGATTTCTGATCCAGTTGGTTTCCTTCCTGCTTTAGATGGAGTCGCCTCTTCCTCCTCAACAAGAGGTGATGAAAAATATGAGACTAGGGAGTCACTCAAGCAGAAGATTATGAAGGCTTTAAAAGACCCTAATTCATGCAACATTGGGGTGTATGGGTTGGGTGGGGTGGGTAAGACCACTCTGGTGAAGGATGTTTTTCAAATAGCCAAGCAACAAAAATTGTTTGATGAAGTGGTTAAAACACATGTATCCAAAAATCCAGAATTGAAAACAATTCAAGGGGAGATTGCAGATATGTTGGGTCTGCGATTCCTTGAGGAGACTATTCAAGGCAGAGCTGATCGACTGAGACAGAGAATCAAGAAAGAGAAAAGTATCCTTATCATTCTAGATGATATATGGACCGTAATTGATTTGAAGGAAGTGGGAATTCCATTAATTGATGAGCATAATGGTTGCAAATTGTTGATGACAAGTAGAAATCAAGACGTGTTGGTGCAAATGGACGTTCCAGAGGATTTCGCTTTCAAACTTGAACTTATGAGTGAAAAAGAGACATGGAGCTTGTTTCAACTTATGGCTGGTGATGTGGTTAACAATAGGGATTTGAAAGATTTTGCAATTCAGGTTGCCCAAAAATGTGCAGGTTTGCCTCTTAGTATCACTACGGTAGCGCGTGCAATGAAAAATAAGAGGGATGTCCAATATTGGAAAGATGCATTAAGGAAATTACAATGTAATAATCACGAAGGGGTGCATGCGACAAGTTATTATGCTCTGGAGTTGAGTTACGACTCATTGGAAAGTGATGAAGTTAGGGATCTATTCTTGCTATATGCTTCAATTCCAAATCAAAATGTTGAGTATTATCTGAAAGTTGCAATGGGTTTGGACATATTAAATGATGTTAAAACCATTGATGATGCAAGAAACAAACATTACACAATAATCAAATCTTTGGAGGCGAGGTGTCTTTTGCTTGAAAGTAAAACAAGCGGATTGATCATAATGCATGACGTTGTTCGTGATTTTGCTACCTCCATAGCACGTAGAGATAAACATGTATTTTTAAGGAAATTTGCTGATGAGGAATGGCCAACCAATGATCTTTTAAACAGGTGCACCCAAATCATTCTACATAGGTGTCATCATATGGACGAGCTTCCACAAAGGATCGATTGTCCATGCATTAAATTTTTCTATTTGTGCAGTGAGAATCGATCTTTAGAAATCCCTCATACATTTTTTGAGGATATGAAAAGCCTTAAAATGCTAGATTTAACATCTTTGAACTTGCCTTCATTACCTACTTCGTTTCGGTTCCTAACGGATCTTAGATCGTTGTGCCTAGATGACTGCATTTTGGAAAATATGGATGCAATAGAAGCTTTGCAAAATTTAGAAATTCTCAGACTCTGGAAATCTTCAATGATCATGTTGCCAAGAGAAATAGGGAGATTAACTCAATTGAAAATGCTTGATTTGAGCCATTCGGGAATAGAAGTAGTTCCACCCAACCTGATATCAAGCTTGACTAAATTGGAGGAGTTGTACATGGGCGATACCTCTATTAATTGGGCAGATGTGAATTCTACAGTTCAAAATGAAAATGCTAGCATTGCCGAGCTTCGAATGCTACCCAACTTGACAGCTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAACTGATGTTTGAGAAGCTGAAAAGATACAAAATAGCTATTGGAGATGTATGGGAATGGTCTGACATTGAGAATGAATCCTTAAGAACATTAATGCTTAAACTTGGTACCAACATACATTTGGAGCACGGAATTAAAGCATTGATTAAAAGTGTTGAGAATTTGTACTTGGATGACGTGGATGGTATTCAAAATGTTCTTTATCAACTAAATGGGGAAGGATTTCCATATCTAAAACATCTCCACGTCCAAAATAATGCACACATGAACCACATAGTTGACTCTAAAGAGAGAAATCAAATCCATGTGTCCTTTCCCATCTTGGAAACTCTGGTACTTGATAATCTTAAAAACTTAGAGCATATATGTCATGGTCCACTTTCAGCTACTTCTTTTGGAAGTCTCAATGTTATCAAAGTCAAGAATTGCTTCCAGCTAAAATATCTTCTCTCCTTTACTTTGATTAAAGAACTTTCTCATCTTTCTAAGATCGAAGTTTGTCAGTGCAATTCTATGAAGGAGATAGTGTCCGCAGACAACAATTCAAGTGCAAATAATGAAAAAATTGAGTTTCTTCAATTGCATTCTTTGACTTTAGAACATTTGGAGACACTTGATAATTTCTTCTCTAATTATTTGACACACTCCACAAGTATTCAAAAGTCTTTTTTCAATGCCCAGGTTGCATTTCCTAATTTGGATACCCTTAAACTGAGCTCACTCAATTTGAGTAAAATTTGGGATGATTATTCCATGTACAACTTGACTAGTTTGATTGTGGAGGATTGTGGCGGATTGAAGTATTTATTCTCTTCTACTGTTGTTAGAAGTTTTAAAAACCTCAAACACCTTGAAATAAGTAATTGTCCTTTGATGGAAGAGGTAATAGCTAAAGAAGAGAGAAAGAATCTGTTGGATGAGGTTCCTTTTTCCAAATTAGAGAAAATAATATTGAAGGACATGGACAACTTGAAGACAATATGGCACCACCAGTTTGAGTCATTGAAGTCGTTGGAAGTGAACAATTGTGAGAAAATTGTGGTAGTTTTTCCTTCTTCAATTCAAACAACTTATAATAAGCTAGAGATTCTGAAGGTTACAAATTGTGCTTTTGTGGAAGAGATATTTGAGTTGACTTTCAACTGTGTAGAGGGTACATCTAATTTGAAAGAAGTTAATATAGATGGATTGCCGAAGCTGAAAAAGATATGGAGTAAGGATCCTCAAAGAATTCTTAGTTTTCAAAATCTAACAAATGTGCAACTTATTGATTGTGAAATTTTGGAGTATCTATTACCATTTTCTGTAGCCACTTGTTGTTCACATCTCAAAGAACTTGTGATAAAACAATGTAGTTGCATGAAGGAAATTGTTGCAGAGGAGAAAGAAACAAGGCTGTGTGAAGCTCCCATATTTGAGTTTAACCAATTGAATACTCTAGTTCTTTGGAACACAAAAAAACTCAAGTGTTTCTATGTTGGAAAGCATACTCTATTATGTCCATCTTTGAAGGACATCTCAGTTGTCAATTGTTTGAAATTGAATTTGTTTAGAACCCTTTCTACAAGCAGCTCTAAAAGTAGTTTTCAATATGACAAACTCTCAGTCATAACTCAACGACCACTTTTCGTCGCCGAAGAGGTGATTCCAAACTTGGAGGAGTTGAGGATAAGACAAAAGGATGCTGACATGATATTGCAAGCCCAAAGCTCAAGTGCCCTTTTTACCAAAATGACCAGTCTTAGTTTAGGAATGTATGAAAATGAAGAGGCTACATTTCCATATTGGTTTCTTAATAATGTCCATACTCTTAAGGACTTAGTTGTTGAATGTAGTTGCTTCAAGAAGATATTTCAAAATGAAAGACAAACAAGTGAGAAGACTCGTACACAGATCAAAAGTTTGATGTTGTCTAAATTACATAAACTTCAACAAATATGTGAGGAAGGATCTCAAATTGACCCAGTTCTTGAGTTCCTAGAACTCTTATGGATTTTAAGTTGTTCTAGTCTGACAAATTTGTTCCCTTCCACTGTCACCCTTAATCATCTGAAGTATCTAGAGATAATAAGTTGCAATGGTCTAAAAAGTTTAATTACAACTCCAACAGCGCAAAGTTTGGTCAAACTCACAATACTTAAGGTAAGAAACTGTAAATCACTTGAAGAAATAATTACCGGAGTAGAAAGTGTTGACGTTGCATTTATTAGTCTACAAGTTTTGATGTTGGAATGTTTGCCAAGCCTCAACAAATTTTGTTCTAGTAAGTTCTTCTTGAAGTTTCCATTGTTGGAGAAAGTAATTGTGAGAGAATGTCCTTACATGAAGATATTTTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAATTGCTGAAAATGAAGAGGAATGGCATTGGAAGGGAAACCTAAATGATACAATAAAAAAAATGTTTGAAGACAAGGTTGCATTTTCTAAATTCAAATATTTAGCCTTATCGGACCACCCTGTGCTAAAGGATTTATGGTATGTCCAAGTTGATCATCAGAATGTATTTTGCAATCTGAAACATCTATTGGTGCAGAGATGTGATTTTTTATCACATATACTTTTTCCATCAAATGTTCTTCAAGTGCTACGTGGATTGGAAGAACTAGTAGTATACAACTGTGATTCATTAGAAACCATATTTGATGTTAAAGGTATGAAGTCTAATGAATCAACATTGATAAAGCAAAGCTGTCAATTGAAAACCTTGACTTTGTCTTGCTTACCAAACTTAAAGCACATATGGAACGAGGATCCTCATGAGATTATGAACTTTGGAAACATATGCTCAGTGAATGTTTCTTTATGCCAAAGCTTGTTATACATCTTTTCATTGCCACTATGCCAAGATCTTGGAAATCTTGAAATGCTTGAGATAGATTCTTGTGGAGTCGAGGATATTGTTTCAATGAAAGAAGGATCAATGGAAATCAGTTTTAATTTTCCACAACTAAATGCATTGGTACTACGTAGTTTGACAAATCTAAAGAGTTTCTATCAAGGAAAACATACTTTAGAGTGTCCTTCATTGAAGACTTTGAATGTATATCGTTGTGAAACATTAAGAATGTTTTCCTTCAACAATTTAGATTTGCGACAACCTGATGAATATTCTCACCAAGCCCTTTTTTCAATGGAAAAGTTAAGCACCAACCTGGAGGAATTGGCAATAAATGCCAGTGATGCCTTTAGAATGTTGAATGATCACTGTCAAGAAAATTTCTTTCCTAAAATACAATTTCTTCGTTTGCAAGGCTTCGATGAAACTCCAACTATTTTCTTGAATGATTTCCTTGCAATATTACCTAAACTAACAACTCTTCAGTTGCGTAATAGTTGTTTTGAAACATTATTCCCTTCAAAAGGAACTCCTGGAAATCTCGATGACAAACTTTCTAAGAAAATAAAAGAGTTGTGGCTTTATGAATTGGAAAAGGTCAAGTATATTTTGCACGAAGGTCTTCCATTGGATCTTGAAGTTTTATACGTAAATAGCTGTCCAAGTTTGATAAGCTTGGTATCATCGTCCACATCTTTTACAAATCTAACCACTTTGGAGGTGGAGAATTGCAAAGAGATGATTTACTTGATAACATCTTCAACAGCTAAAAGCTTAGTTCAACTCAAAGAATTAAAAATAAAGAATTGTGACAAGATGTTGGATGTTGTAAAGATTGATGATGAAAAAGTAGAGGAAGACGTCATATTTGAAAACTTGGAAACCTTAAAATTCATTTCTTTGTTAAGTTTAAGAAGCTTCTCCAATGGGAAACAAACATTCATATTCCCATCTTTGGTGCGTTTCGTTGTTAAAAGTTGTCCTCAAATGAAGAATTTCTCATTAGATGTCACAGAAGCACCATACCTGACAGGAATTGAAGTTGCAGACAAAAATATACGATGGAAAGGTGATCTTAACACAACTATTGAACAATTGTTCTTAGAAAAGGAAGCCCCACATTCTAATGGGACCATCTTATAA 6102 0.3564 MDILISVVGKVAEYTVAPIGRQASYLICYKANFKTLADHVKDLEDERERMMRLVEEEERKGKTIFQGVESWIENVKEITEKANHLQNDPRHANVRCSAAWPFPNLISRHQLSRKATKIAKDVVQVQGKKISDPVGFLPALDGVASSSSTRGDEKYETRESLKQKIMKALKDPNSCNIGVYGLGGVGKTTLVKDVFQIAKQQKLFDEVVKTHVSKNPELKTIQGEIADMLGLRFLEETIQGRADRLRQRIKKEKSILIILDDIWTVIDLKEVGIPLIDEHNGCKLLMTSRNQDVLVQMDVPEDFAFKLELMSEKETWSLFQLMAGDVVNNRDLKDFAIQVAQKCAGLPLSITTVARAMKNKRDVQYWKDALRKLQCNNHEGVHATSYYALELSYDSLESDEVRDLFLLYASIPNQNVEYYLKVAMGLDILNDVKTIDDARNKHYTIIKSLEARCLLLESKTSGLIIMHDVVRDFATSIARRDKHVFLRKFADEEWPTNDLLNRCTQIILHRCHHMDELPQRIDCPCIKFFYLCSENRSLEIPHTFFEDMKSLKMLDLTSLNLPSLPTSFRFLTDLRSLCLDDCILENMDAIEALQNLEILRLWKSSMIMLPREIGRLTQLKMLDLSHSGIEVVPPNLISSLTKLEELYMGDTSINWADVNSTVQNENASIAELRMLPNLTALELQIRETWMLPRDLQLMFEKLKRYKIAIGDVWEWSDIENESLRTLMLKLGTNIHLEHGIKALIKSVENLYLDDVDGIQNVLYQLNGEGFPYLKHLHVQNNAHMNHIVDSKERNQIHVSFPILETLVLDNLKNLEHICHGPLSATSFGSLNVIKVKNCFQLKYLLSFTLIKELSHLSKIEVCQCNSMKEIVSADNNSSANNEKIEFLQLHSLTLEHLETLDNFFSNYLTHSTSIQKSFFNAQVAFPNLDTLKLSSLNLSKIWDDYSMYNLTSLIVEDCGGLKYLFSSTVVRSFKNLKHLEISNCPLMEEVIAKEERKNLLDEVPFSKLEKIILKDMDNLKTIWHHQFESLKSLEVNNCEKIVVVFPSSIQTTYNKLEILKVTNCAFVEEIFELTFNCVEGTSNLKEVNIDGLPKLKKIWSKDPQRILSFQNLTNVQLIDCEILEYLLPFSVATCCSHLKELVIKQCSCMKEIVAEEKETRLCEAPIFEFNQLNTLVLWNTKKLKCFYVGKHTLLCPSLKDISVVNCLKLNLFRTLSTSSSKSSFQYDKLSVITQRPLFVAEEVIPNLEELRIRQKDADMILQAQSSSALFTKMTSLSLGMYENEEATFPYWFLNNVHTLKDLVVECSCFKKIFQNERQTSEKTRTQIKSLMLSKLHKLQQICEEGSQIDPVLEFLELLWILSCSSLTNLFPSTVTLNHLKYLEIISCNGLKSLITTPTAQSLVKLTILKVRNCKSLEEIITGVESVDVAFISLQVLMLECLPSLNKFCSSKFFLKFPLLEKVIVRECPYMKIFSEGNTSTPNLRKVKIAENEEEWHWKGNLNDTIKKMFEDKVAFSKFKYLALSDHPVLKDLWYVQVDHQNVFCNLKHLLVQRCDFLSHILFPSNVLQVLRGLEELVVYNCDSLETIFDVKGMKSNESTLIKQSCQLKTLTLSCLPNLKHIWNEDPHEIMNFGNICSVNVSLCQSLLYIFSLPLCQDLGNLEMLEIDSCGVEDIVSMKEGSMEISFNFPQLNALVLRSLTNLKSFYQGKHTLECPSLKTLNVYRCETLRMFSFNNLDLRQPDEYSHQALFSMEKLSTNLEELAINASDAFRMLNDHCQENFFPKIQFLRLQGFDETPTIFLNDFLAILPKLTTLQLRNSCFETLFPSKGTPGNLDDKLSKKIKELWLYELEKVKYILHEGLPLDLEVLYVNSCPSLISLVSSSTSFTNLTTLEVENCKEMIYLITSSTAKSLVQLKELKIKNCDKMLDVVKIDDEKVEEDVIFENLETLKFISLLSLRSFSNGKQTFIFPSLVRFVVKSCPQMKNFSLDVTEAPYLTGIEVADKNIRWKGDLNTTIEQLFLEKEAPHSNGTIL 2033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04169 2033 SUPERFAMILY RNI-like 1606 1763 - -
Vivi4g04169 2033 SUPERFAMILY RNI-like 1735 1986 - -
Vivi4g04169 2033 Coils Coil 68 88 - -
Vivi4g04169 2033 FunFam Probable disease resistance protein At1g61300 143 302 - -
Vivi4g04169 2033 Gene3D - 309 397 IPR042197 -
Vivi4g04169 2033 SUPERFAMILY L domain-like 859 1215 - -
Vivi4g04169 2033 SUPERFAMILY L domain-like 1244 1622 - -
Vivi4g04169 2033 PRINTS Disease resistance protein signature 176 191 - -
Vivi4g04169 2033 PRINTS Disease resistance protein signature 971 987 - -
Vivi4g04169 2033 PRINTS Disease resistance protein signature 343 357 - -
Vivi4g04169 2033 PRINTS Disease resistance protein signature 249 263 - -
Vivi4g04169 2033 Pfam NB-ARC domain 159 394 IPR002182 GO:0043531
Vivi4g04169 2033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 406 IPR027417 -
Vivi4g04169 2033 SUPERFAMILY L domain-like 466 894 - -
Vivi4g04169 2033 Gene3D Ribonuclease Inhibitor 500 878 IPR032675 -
Vivi4g04169 2033 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1754 1987 - -
Vivi4g04169 2033 Coils Coil 33 60 - -
Vivi4g04169 2033 Gene3D Ribonuclease Inhibitor 879 1048 IPR032675 -
Vivi4g04169 2033 Gene3D Ribonuclease Inhibitor 1049 1229 IPR032675 -
Vivi4g04169 2033 Gene3D Ribonuclease Inhibitor 1243 1427 IPR032675 -
Vivi4g04169 2033 Gene3D Ribonuclease Inhibitor 1735 1909 IPR032675 -
Vivi4g04169 2033 Gene3D - 143 302 IPR027417 -
Vivi4g04169 2033 Gene3D Ribonuclease Inhibitor 1428 1734 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04169 Vivi-Chr4 167386547 167406918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04169 177 571 WRKY Transcription Factor Family AT5G45050 24.541 3.45e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04169 - - psat:127092588 2619.73