Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04161 ATGGGAATAAGAGATTTTCGTATCAAAATCAAGGCTTTGAGAGTGAAACTATCATGCTTAGGAAAAAGAAGCACAAGAACAAGAAGAAACCATGAAGCTTCAAGCAAACCTTCATGGATGACGCCGATATCGCACGGTCATCATGTGGTGGAGCATGATTTATTTGAAGGTGATGATTATGAATTTGATTCAGTTGTGATACAAAGAGAGCAAATTGGAGAGGCTGAAGTCTGGTATTTTGGAATTTTTGATCCTTTGATTGGAGATTGTGTTACCAAGTATTTGCAATCTAATTATTTTGACAAGAAGCTCAATGAGACTCATTTGGCAAGAAAAGCCAAAGAAACACTCAAGAAAGCATACCTAGGTGCAAAAACAAAGATAAGAGAAACACACAAATCAGAGGAAACTTTCTTAATAGGTTCAACATCAGTGATAATAATAAATGGAGAAAAACTTGTACTAGCCAACATAGGAGATTACAGAACTGTTTTGTGCAAAGATGGTGTAGCTTATCAGACACATGGAAGATACAACCAATCCGGCAAGAAACATTGGTACCACAGACTCTTTTCAGGTGGTAATGCAACTGCTACAAAGTATTCTAAAGCTTCAGAACTAGTGGTTGGAGGTTACTATCGGATCGACTCGTATATTGAGTTTGTGATTTTAGCAAGCAATGGAATATGGGAGGTGATGAAGAACCAAGAGGCAGTGAATCTTATCAGGCACATAGAGGATCCACAAGAAGCAGCTGAGTGTCTGGCTAAGGAAGCATTGGTTAGGAGGAGCAAAGGCAACATTTCATGTTTAATCATTCGATTCGATTGA 831 0.3827 MGIRDFRIKIKALRVKLSCLGKRSTRTRRNHEASSKPSWMTPISHGHHVVEHDLFEGDDYEFDSVVIQREQIGEAEVWYFGIFDPLIGDCVTKYLQSNYFDKKLNETHLARKAKETLKKAYLGAKTKIRETHKSEETFLIGSTSVIIINGEKLVLANIGDYRTVLCKDGVAYQTHGRYNQSGKKHWYHRLFSGGNATATKYSKASELVVGGYYRIDSYIEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKGNISCLIIRFD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04161 276 SUPERFAMILY PP2C-like 69 276 IPR036457 -
Vivi4g04161 276 Gene3D - 196 276 IPR036457 -
Vivi4g04161 276 SMART PP2C_4 37 273 IPR001932 -
Vivi4g04161 276 Gene3D - 49 187 IPR036457 -
Vivi4g04161 276 PANTHER PROTEIN PHOSPHATASE 45 274 IPR015655 GO:0004722|GO:0006470
Vivi4g04161 276 CDD PP2Cc 63 275 IPR001932 -
Vivi4g04161 276 ProSiteProfiles PPM-type phosphatase domain profile. 59 275 IPR001932 -
Vivi4g04161 276 Pfam Protein phosphatase 2C 74 172 IPR001932 -
Vivi4g04161 276 Pfam Protein phosphatase 2C 219 268 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04161 Vivi-Chr4 167266949 167270283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04161 1 275 PP2C-type Phosphatase Gene Family AT3G23360 43.011 1.98e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04161 K19704 - gmx:100794054 384.415