Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04157 ATGCATGTTTTGACAGTGATGGGGAAGACAAGCAAATGGTTTAGGAATCTTTTGAAAGGGAAGAAAGACAAAGACAAAGAAAAAGAGAAGGAAGATTGTGGAAATGGAACAGAAAATCCAACTACTCCAATCTCAGCAACGCCAAAGGAGAAGAGAAGATGGAGTTTCAGAAGATTGTCAGCTTCTAAGGAAGTTCATGTTGCAGAATCTAGTGTCACTTCAGTGACATTACAATCTGTCACAGATTCTCAGAATTATCAGAGGAAGCATGTCATGGATGTTGCTGCTGCAGATGGTGTGATCTTCTTGAATTCTTGTTCCAATGGAGGAACTAGAAGGAGTATTGAAGTGGCTTCTGCTATTAAAATTCAATCTGTCTTTAGATCCTACCTGGCGAAAAAGGCATTGTGTGCTCTTAGAGGAATAGTGATGCTGCAAGCACTAGTAAGAGGCCACTTAGTGAGAAAACAAGCAACTGAGACATTAAGATGCATGCAAGCTTTGGTCTTAGCACAAGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTATCAGAAGAAAAGGCTAATCAAAAGCATGCAACCTACAGAAAAGCCACAGAGGACAGCTTATTCATGCATATGTTTAATGAAATAGAAAGAGGCTTAGAAGAGAATATAAAGACAGTGGAGATGGATGTTTGTGAATCCAAAGGCAACTCAAGAGGCAGAAACAACACTACAAATCATGAACACCATGGATTCTCTGAACACAGACTTTCAGCATATTATTCACCAAATGGTTCATACTCAAAGAAAGAAAACTACAAAGTATTTCCTACACCATCCGCGCGAACCGACTCAAGTCCAAAAGCATGCAGTGGATATTTGGAGGACGGTTCCTTCACTACAGCACAGAACAGTCCCTATTACTACTCAGCAGTTTCAAGAGCAGATGATTCAAAGCTTCCTTTTTCTTTCACTAGACAACCCTACGAAGAATCCATGGCCAATGAATATCCGTTATTTCCAAACTACATGGCTAACACAGAATCATCAAGAGCTAAAGTAAGATCGCAGAGTGCACCGAAGCAAAGACCGGACTCATATGAAAGGCAACCGAGTCGGCGAAGAGCTTCTGTGGAAGGAAGAAATGTTCCAAGACCTGTGAGGATGTTGAGATCATCTTCACATGTTGGGGCCACTGCACAAAATTATCAATATCCATGGTCTGTAAAGCTTGATAGGTCCTCAGCTTCACTCAATGACAATGACTGTGGCTCTACAAGTACAGTACTAACAAACTCTAACTATTGCAGATCTCTTGTTTCATATAATCCTCATGGACCAAGCGACTGA 1335 0.4105 MHVLTVMGKTSKWFRNLLKGKKDKDKEKEKEDCGNGTENPTTPISATPKEKRRWSFRRLSASKEVHVAESSVTSVTLQSVTDSQNYQRKHVMDVAAADGVIFLNSCSNGGTRRSIEVASAIKIQSVFRSYLAKKALCALRGIVMLQALVRGHLVRKQATETLRCMQALVLAQARACAQRARMLSEEKANQKHATYRKATEDSLFMHMFNEIERGLEENIKTVEMDVCESKGNSRGRNNTTNHEHHGFSEHRLSAYYSPNGSYSKKENYKVFPTPSARTDSSPKACSGYLEDGSFTTAQNSPYYYSAVSRADDSKLPFSFTRQPYEESMANEYPLFPNYMANTESSRAKVRSQSAPKQRPDSYERQPSRRRASVEGRNVPRPVRMLRSSSHVGATAQNYQYPWSVKLDRSSASLNDNDCGSTSTVLTNSNYCRSLVSYNPHGPSD 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04157 444 MobiDBLite consensus disorder prediction 18 35 - -
Vivi4g04157 444 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
Vivi4g04157 444 MobiDBLite consensus disorder prediction 343 390 - -
Vivi4g04157 444 MobiDBLite consensus disorder prediction 361 376 - -
Vivi4g04157 444 Pfam Protein of unknown function (DUF4005) 323 375 IPR025064 -
Vivi4g04157 444 MobiDBLite consensus disorder prediction 343 360 - -
Vivi4g04157 444 Pfam IQ calmodulin-binding motif 140 157 IPR000048 GO:0005515
Vivi4g04157 444 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Vivi4g04157 444 Gene3D - 116 167 - -
Vivi4g04157 444 PANTHER IQ-DOMAIN 5-RELATED 7 374 - -
Vivi4g04157 444 MobiDBLite consensus disorder prediction 18 50 - -
Vivi4g04157 444 ProSiteProfiles IQ motif profile. 116 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04157 Vivi-Chr4 167213384 167215878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04157 6 434 IQD Protein Family AT4G14750 43.142 1.69e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04157 - - gmx:100817667 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04157 4 167213384 167215878 Vivi4g04157 4 167213384 167215878 ECH