Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04156 ATGGGGAAGACAAGCAAATGGTTTAGGAATCTTTTGAAAGGGAAGAAAGACAAAGACAAAGAAAAAGAGAAGGAAGATTGTGGAAATGGAACAGAAAATCCAACTACTCCAATCTCAGCAACGCCAAAGGAGAAGAGAAGATGGAGTTTCAGAAGATTGTCAGCTTCTAAGGAAGTTCATGTTGCAGAATCTAGTGTCACTTCAGTGACATTACAATCTGTCACAGATTCTCAGAATTATCAGAGGAAGCATGTCATGGATGTTGCTGCTGCAGATGGTGTGATCTTCTTGAATTCTTGTTCCAATGGAGGAACTAGAAGGAGTATTGAAGTGGCTTCTGCTATTAAAATTCAATCTGTCTTTAGATCCTACCTGGCGAAAAAGGCATTGTGTGCTCTTAGAGGAATAGTGATGCTGCAAGCACTAGTAAGAGGCCACTTAGTGAGAAAACAAGCAACTGAGACATTAAGATGCATGCAAGCTTTGGTCTTAGCACAAGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTATCAGAAGAAAAGGCTAATCAAAAGCATGCAACCTACAGAAAAGCCACAGAGGACAGCTTATTCATGCATATGTTTAATGAAATAGAAAGAGGCTTAGAAGAGAATATAAAGACAGTGGAGATGGATGTTTGTGAATCCAAAGGCAACTCAAGAGGCAGAAACAACACTACAAATCATGAACACCATGGATTCTCTGAACACAGACTTTCAGCATATTATTCACCAAATGGTTCATACTCAAAGAAAGAAAACTACAAAGTATTTCCTACACCATCCGCGCGAACCGACTCAAGTCCAAAAGCATGCAGTGGATATTTGGAGGACGGTTCCTTCACTACAGCACAGAACAGTCCCTATTACTACTCAGCAGTTTCAAGAGCAGATGATTCAAAGCTTCCTTTTTCTTTCACTAGACAACCCTACGAAGAATCCATGGCCAATGAATATCCGTTATTTCCAAACTACATGGCTAACACAGAATCATCAAGAGCTAAAGTAAGATCGCAGAGTGCACCGAAGCAAAGACCGGACTCATATGAAAGGCAACCGAGTCGGCGAAGAGCTTCTGTGGAAGGAAGAAATGTTCCAAGACCTGTGAGGATGTTGAGATCATCTTCACATGTTGGGGCCACTGCACAAAATTATCAATATCCATGGTCTGTAAAGCTTGATAGGTCCTCAGCTTCACTCAATGACAATGACTGTGGCTCTACAAGTACAGTACTAACAAACTCTAACTATTGCAGATCTCTTGTTTCATATAATCCTCATGGACCAAGCGACTGA 1317 0.4108 MGKTSKWFRNLLKGKKDKDKEKEKEDCGNGTENPTTPISATPKEKRRWSFRRLSASKEVHVAESSVTSVTLQSVTDSQNYQRKHVMDVAAADGVIFLNSCSNGGTRRSIEVASAIKIQSVFRSYLAKKALCALRGIVMLQALVRGHLVRKQATETLRCMQALVLAQARACAQRARMLSEEKANQKHATYRKATEDSLFMHMFNEIERGLEENIKTVEMDVCESKGNSRGRNNTTNHEHHGFSEHRLSAYYSPNGSYSKKENYKVFPTPSARTDSSPKACSGYLEDGSFTTAQNSPYYYSAVSRADDSKLPFSFTRQPYEESMANEYPLFPNYMANTESSRAKVRSQSAPKQRPDSYERQPSRRRASVEGRNVPRPVRMLRSSSHVGATAQNYQYPWSVKLDRSSASLNDNDCGSTSTVLTNSNYCRSLVSYNPHGPSD 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04156 438 ProSiteProfiles IQ motif profile. 110 134 IPR000048 GO:0005515
Vivi4g04156 438 Pfam Protein of unknown function (DUF4005) 317 369 IPR025064 -
Vivi4g04156 438 MobiDBLite consensus disorder prediction 337 384 - -
Vivi4g04156 438 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Vivi4g04156 438 MobiDBLite consensus disorder prediction 355 370 - -
Vivi4g04156 438 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Vivi4g04156 438 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Vivi4g04156 438 Gene3D - 110 161 - -
Vivi4g04156 438 MobiDBLite consensus disorder prediction 10 29 - -
Vivi4g04156 438 MobiDBLite consensus disorder prediction 337 354 - -
Vivi4g04156 438 MobiDBLite consensus disorder prediction 1 44 - -
Vivi4g04156 438 PANTHER IQ-DOMAIN 5-RELATED 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04156 Vivi-Chr4 167212889 167215878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04156 1 428 IQD Protein Family AT4G14750 43.237 8.09e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04156 - - gmx:100817667 529.635