Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04148 ATGGAAATTCTAACTTCTGTTGTTGGAATAGTAGCAGATTATACTGTTGTTCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGCTAATTTCAATATGTTAGCAGATCATGTTAAAGATCTGGAGGCTGCAAGCGAAAGAATGATCCATTTGGTTGAACAAGAAAAAAGAAATGGTAAAGAAATTGAAAGACAAGTGCTGAACTGGTTTGAGATAGTGAACGAGGTCATTGAAAAGGCAAACCAGCTTCAAAAAGACCCCCGTCGTGCCACTGTTAGGTGCTCAGCATGGCCGTTCCCTAATTTGCTTTTGCGTCATCAACTAAGTAGGAAAGCCACAAAACTTGCAAAAGATGTTGTTCAAGTTCAAGGAAAAGGGATTTTTGATCGAGTTGGTTACCTTCCCGCTCTAGATGGAGTAGCCTCCTCCAGCTCAACAAGAGGTGATGAAAAATATGAGACAAGGGAGTCACTTAAGCAAGAGATTATGAAGGCTTTAACAGACAATAATTTACGCAACATTGGGGTGTATGGGTTGGGTGGGGTGGGTAAGACCACTCTGTTGGAGGAAATTTCTGAAATAGCAAAGCAACAAAAATTGTTCGATGAAGTGGTTACAACACATGTATCCAAAAATCCAGACATGAAAACAATCCAAGGGGAGATTGCAGATCTGTTAGGCTTGCGATTCGATGAGGAGACTATTCTTGGCAGAGCTCATCGCCTAAGACAGAGAATCAAGATGGAGAAAAATATCCTTGTCATTCTAGATGATATATGGACCAGAATTGATTTGAAGAAAGTGGGAATTCCATTTGGTAATGAGCATAATGGTTGCAAATTGTTGATGACAAGTAGAAATCAAGATGTTTTGGTGCAAATGGATGTCCCAAAGAATTTCACTTTCAGACTTGAACTTATGAGTGATGAAGAGACATGGAGCTTGTTTCAATTTATGGCTGGTGATGTGGTTAACAACAGGGATTTGAAAGATGTAGCAATTCAAGTTGCCCAAAAATGTGCAGGTTTGCCTCTTAGTGTCGTTACGGTAGCACGTGCAATGAAAAATAAGAGGGATGTCCAATCTTGGAAAGATGCATTAAGAAAGTTACAATGTAATAATCACACAGGGATTGACGCGTTAACTTATTCCGCTTTGGAATTGAGTTACAACACACTAGAGAGTGATGAAATTAAGGCTCTATTCTTGCTTTTTGCATTACTTCGAGGCGGTCATGTAGAGTATTCTATGAAAGTTGCAATTGGTTTGGACATGTTAAAGAATGTTAATACCATGGATGATGCAAGAAACAAACATTACAGAATAATCAAATCTTTGGAGGAGACTTGTCTTTTGCTTGAAAGAAAAGCAAATGGAAATATCGAAATGCATGACTTTGTTCGTGATTTTGCTATCTCCATAGCCCGCAGAGACAAACATGCATTTCTAAGGAAATTCGCTGATGAGGAATGGCCAACCAATGATTTTTTAAACCGGTGCACGCAGATCGTTCTATATAGGTGTCATCATTTGCACGAGCTTCCTCAAATGATTGATTGTCCAAGCATTAAGTTTTTCTATTTGAACAGCAATAATCGATCTTTAGAAATCTTGGATGCATTTTTTGAGGGTATGAAAAGCCTTACAGTGCTAGATTTAACATCTCTGAACTTGCCTTCGTTACCTACTTCGTTTCGGTTCCTAACCAACCTTAAATCGTTGTGTTTAGATTTATGTGTTTTGGAAAATATGGATGCCATAGAAGCTTTGCAAAATTTAGAAATTCTTAGCCTCTGTGAATCTTCAATGATTGATCTGCCAAGCGAAATAGGGAGATTGACTCAATTGAGAATGCTTGATTTGAGTCATTCAGGAATAGAAGTAGTCCCGCCCAATATCATATCAAACTTGACTAAATTGGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGAAAGATGTGAATTCTACAGATGTAAATGCTAGCATTGCCGAGCTTCGAAAACTACCCAACTTGACAGCTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAATTGGTGTTTGAGAAGTTGAGAAAATACAAAATAGCTATTGGAGATAAATGGGAATGGTCTGACATTGAGGACGGAACCTTAAAAACATTGATGCTCAAACTTGGTGCCAATATACATTTGGAGCACGGAATTAAAACATTGATTAGAAGTGTTGAGAATTTGTACTTGGATGACGTAGATGGAATTCAAAATGTGCTTTTTCAACTAAGTGGGGAAGGATTTCCATTGCTAAGACATCTCCACGTCCAAAATAATGCAAACATAATGCACATTGTTGACTCAAAAGAGAGGAATCAAATCCATGTGTCATTTCCCATCTTGGAAACACTAGTACTTGATAATCTTAAGAACTTAGAGCATATATGTCATGGTCCACTTTCAATTTCTTCTTTTGGAAGTCTTGGTGTTATCAAAGTAAAAAATTGCATCCAGTTAAAATATCTTCTTTCCTTTACAATGGTAAAAGAACTTTCCCATCTTTCTAAGATTGAAGTTTGCCAGTGCAATTCTATGAAGGAGATAGTGCTCGAAGACAACAATTCAAGTTCAAATAATGATAGAGCTAATGAAAAAATTGAGTTTCTTCAGTTGCGTTCTTTGACTTTAGAACATTTGGAGACACTTGATAATTTCTTCTCTAATTATTTGACACACTCCACAAGTATTCAAAAGTATCAAGGTTTAGAACCATATGTTTCTCCTCCATTTTTCAATGCTCAGGTTGCATTTTGTAATTTGGACACCCTTGAATTGAGGTCACTTAATTTGAGTAAAATTTGGGATGACAATCATTATTCTATGTACAACTTGACTAGCTTGATTTTGGAGAATTGTGGCGGGTTGAAGTACTTGTTTTCTTCTACTGTGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATACGCAACTGTCCTTTGATGGAGGAGATAATAGTTAAAGAAGAGAGAAACAATGCATTGAATAAGGTTCCTTTTTTCAAGTTAGAGAAAATAATATTGAAGGACATGGACAACTTGAAGACAATATGGCACCACCAGTTTCAGTCATTGAAGTCCTTGGAAATCAACAATTGTGAGAAAATTGTGATAGTTTTTCCTTCTTCAATTCAAAAAACTTATAATAAGCTAGAGATGTTAGAAGTTACAAATTGTGCTTTGGTGGAAGAGATATTTGAATTGACTATCAGCTGTGTAGAGGATACAACACATTTGAAGGAAGTTACTATAGATGGATTGCCGAAGTTGAAAAAGATATGGAGCGGAGATCCTCAAGGAATTCTTAGTTTTCAAAATCTAAAATATATTCATCTAAAGGGTTGTGAAAGTTTGGAGTATCTATTACCACATTCTGTAGCCACTCGTTGTTCACATCTCGAAGAAGTTACGATAAACGATTGTGCAAGCATGAGTGAAATTGTTGCAGAGGAGAAAGAATCTAGATTGTGTGCTGCTCCCATATTTGAGTTTAGTCAATTGGTTACTCTAGTGCTTTGGAACTCATGCAGACTCAAGGGTTTTTATGCTGGAAAGCATACTTTATCATGTCCATCTTTGAAGAAAATCGATGTTTCGAAATGTTCATCTTTGAATTTGTTTAGAACTCTTTCAACAAGCAGCTCTATAAGTAGTTTTCAATATGACAAACTCTCAGTCATAACTCAACAGCCACCTTTCATTGCTGAAGAGGTGATTCCAAACTTGGAGGAGTTGAGGATAGGACAAAAGGATGCTGTCATGATATTGCAAGCCCAACACTCAACTGCCCTCTTTACCAAACTGTCATTTCTTGGTTTGGGGATGTATAACAATGAAGAGGCTATATTTCCTTATTGGTTTCTTATCAATGTGCATACTCTTGAGTGGTTAGTTATTGAGTTGAGTTGCTTCAAGAAGATATTTCCAGATGAAAGACAAATAATTGAGAAGACTAGTGCACGAATCAAAAAGCTGACATTGAGTTTATTACATAAACTTGAACATATATGTGACGAAGGATCTCAAATTGACCCAGTTCTTGAGTTCCTTGAATGCTTATGGGTTTTTGGCTGTTCTTGTCTGACAAATCTGTTGCCTTCCTCTGCCACCCTCAATCATCTGGATTATCTAGAGATAACATGTTGCGATGGGCTAAAAAGTTTAATTACAACTTCTACAGCCCAAAGTTTGGTCAAACTCACAACACTTAAGGTAAAAGACTGTAAATCACTTGAAGAAGTAATTACCGGAGTAGATAATGTTGACATTGTATTTATTAGTTTGGAAGTTTTGATGTTGGAATGTTTGCCAAGCTTCAAGAAATTTTGCTCTAGTAAGTGCTTCTTGAAGTTTCCATTGTTGAAGGAAGTAATTGTGAGAGAATGTCCTTACATGAAGGTATTTTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAATTAAAATTGCAGACAATAAAGAAGAATGGTTTTGGAAGGGAAACCTTAATGATACAATAAACAAAATGTTTGAAGATAAGGTTGCATTTTCTAAATTCAAATATTTAGCCTTATCCGACCACCCTGAGTTAAAGGATTTGTGGTATGGTCAAGTTGATCATCAGAATGTATTTGGCAATCTGAAACATCTAGTGGTGCAAAGATGTGATTTCTTATCACATGTACTTTTTCCTTCAAATGTTGTTCATGTGCTACATGGATTGGAGAAACTAGAGGTAAACGACTGTGATTCATTAGAAGTCATATTTGATGTGAAAGGAATGAAGTCTAATGAATTAATATTGATAAAACAATACAGTCAATTGAAAACATTGACTTTGTCCTGCTTACCAAACTTAAAGCACATATGGAACGAGGATCCTCACGAAATTATGAACTTTGGAAACCTATGCTCGGTGGTTATTTCTTCGTGCCAAAGATTGTTATATATCTTTTCATTGTTACTATGCCAAGATCTTGGAAATCTTGAAATGCTTAAGATACGGTCTTGCGGAGTCGAGGATATTGTTGCAATGAAAGAAGGATCAATGGAAATCAGTTTTAATTTTCCCCAACTAAATACACTGGCACTTCATTGTTTGTCAAATCTAAAGAGTTTCTATCAAGGAAAACATACTTTAGAGTGCCCTTCACTGAAGACTTTGAATGTATATCGTTGTGAAACATTAAGAATGTTTTCCTTCAACAATTTAGACTTGCAACAACCTGATGAAAATTCTCAACAAGCTATTTTTTCTATGGAAAAGCTAAGCACAAACTTGGAGGATTTGTCAATAAATGCAAAGGATGCCTTTAGAATGTTGAATGATTACTGTCAAGAAAATATCTTTCCTAAAATACAACATCTTCGTTTGCAATGTTTCGATGAAACTCCAGCTATTTTTCTCAATGATTTCCATGCAACATTTCCTAATCTAAAAACTCTTACACTGTGGAATTGTTCCTTTAAAATATCATTCCCTTCAAAAGGAACTCCTCACAATCTCAATGACAAACTTTCTAAGCAAATAAAAGTGTTGTGGCTTTATGAAATGGAAAAGATCAGGTATATTTGGCATGAAGAATTTTCGTTGGATCTTGAAGGTTTATGTGTACATAGCTGTCCAAGTTTGATAAGCTTGGTACCATCGTCAACATCTTTCACAAATATAATCTATTTGATTGTGGATGATTGCAAAGAGCTGATTTACTTGATAACATCTTCAACAGCGAAAAGCTTAGTTCAGCTTACAGAATTAAAAATAACGAATTGTAAGAAGGTTTTGGATGTTGTGAAGATTGATGATGTAAAAACAGAGGAAGACATCATATTTAAAAAGTTGAAAAATTTGGTATTAACTTCTCTGTTAAGTTTAAGAAGCTTCTCCAATGGGAAACAGCCATTCATATTCCCATCTTTGGTGCTTATCTCTGTTGAAGGATGTCCTCAAATGAAGAATTTCTCATTAGGAGTTACAGAAGCACCACACCTAACAGGAATTGAAGTTGAAGACAAAAATATACGATGGAAAGGTGATCTTAACACAACTATTGAACAATTGTTCATAGAAAAGGAAGCCCCCCATTGTAATAGGACCATCATATCATCATATTTGCAAGATGATGAGATTGCATGCGAAGATGATGTTCAGGTCGCATGCGAAGATGGTATCAATGCAGATGCTAAGGAGTGA 6228 0.3608 MEILTSVVGIVADYTVVPIGRQASYLIFYKANFNMLADHVKDLEAASERMIHLVEQEKRNGKEIERQVLNWFEIVNEVIEKANQLQKDPRRATVRCSAWPFPNLLLRHQLSRKATKLAKDVVQVQGKGIFDRVGYLPALDGVASSSSTRGDEKYETRESLKQEIMKALTDNNLRNIGVYGLGGVGKTTLLEEISEIAKQQKLFDEVVTTHVSKNPDMKTIQGEIADLLGLRFDEETILGRAHRLRQRIKMEKNILVILDDIWTRIDLKKVGIPFGNEHNGCKLLMTSRNQDVLVQMDVPKNFTFRLELMSDEETWSLFQFMAGDVVNNRDLKDVAIQVAQKCAGLPLSVVTVARAMKNKRDVQSWKDALRKLQCNNHTGIDALTYSALELSYNTLESDEIKALFLLFALLRGGHVEYSMKVAIGLDMLKNVNTMDDARNKHYRIIKSLEETCLLLERKANGNIEMHDFVRDFAISIARRDKHAFLRKFADEEWPTNDFLNRCTQIVLYRCHHLHELPQMIDCPSIKFFYLNSNNRSLEILDAFFEGMKSLTVLDLTSLNLPSLPTSFRFLTNLKSLCLDLCVLENMDAIEALQNLEILSLCESSMIDLPSEIGRLTQLRMLDLSHSGIEVVPPNIISNLTKLEELYMGNTSINWKDVNSTDVNASIAELRKLPNLTALELQIRETWMLPRDLQLVFEKLRKYKIAIGDKWEWSDIEDGTLKTLMLKLGANIHLEHGIKTLIRSVENLYLDDVDGIQNVLFQLSGEGFPLLRHLHVQNNANIMHIVDSKERNQIHVSFPILETLVLDNLKNLEHICHGPLSISSFGSLGVIKVKNCIQLKYLLSFTMVKELSHLSKIEVCQCNSMKEIVLEDNNSSSNNDRANEKIEFLQLRSLTLEHLETLDNFFSNYLTHSTSIQKYQGLEPYVSPPFFNAQVAFCNLDTLELRSLNLSKIWDDNHYSMYNLTSLILENCGGLKYLFSSTVVGSFKNLKHLEIRNCPLMEEIIVKEERNNALNKVPFFKLEKIILKDMDNLKTIWHHQFQSLKSLEINNCEKIVIVFPSSIQKTYNKLEMLEVTNCALVEEIFELTISCVEDTTHLKEVTIDGLPKLKKIWSGDPQGILSFQNLKYIHLKGCESLEYLLPHSVATRCSHLEEVTINDCASMSEIVAEEKESRLCAAPIFEFSQLVTLVLWNSCRLKGFYAGKHTLSCPSLKKIDVSKCSSLNLFRTLSTSSSISSFQYDKLSVITQQPPFIAEEVIPNLEELRIGQKDAVMILQAQHSTALFTKLSFLGLGMYNNEEAIFPYWFLINVHTLEWLVIELSCFKKIFPDERQIIEKTSARIKKLTLSLLHKLEHICDEGSQIDPVLEFLECLWVFGCSCLTNLLPSSATLNHLDYLEITCCDGLKSLITTSTAQSLVKLTTLKVKDCKSLEEVITGVDNVDIVFISLEVLMLECLPSFKKFCSSKCFLKFPLLKEVIVRECPYMKVFSEGNTSTPNLRKIKIADNKEEWFWKGNLNDTINKMFEDKVAFSKFKYLALSDHPELKDLWYGQVDHQNVFGNLKHLVVQRCDFLSHVLFPSNVVHVLHGLEKLEVNDCDSLEVIFDVKGMKSNELILIKQYSQLKTLTLSCLPNLKHIWNEDPHEIMNFGNLCSVVISSCQRLLYIFSLLLCQDLGNLEMLKIRSCGVEDIVAMKEGSMEISFNFPQLNTLALHCLSNLKSFYQGKHTLECPSLKTLNVYRCETLRMFSFNNLDLQQPDENSQQAIFSMEKLSTNLEDLSINAKDAFRMLNDYCQENIFPKIQHLRLQCFDETPAIFLNDFHATFPNLKTLTLWNCSFKISFPSKGTPHNLNDKLSKQIKVLWLYEMEKIRYIWHEEFSLDLEGLCVHSCPSLISLVPSSTSFTNIIYLIVDDCKELIYLITSSTAKSLVQLTELKITNCKKVLDVVKIDDVKTEEDIIFKKLKNLVLTSLLSLRSFSNGKQPFIFPSLVLISVEGCPQMKNFSLGVTEAPHLTGIEVEDKNIRWKGDLNTTIEQLFIEKEAPHCNRTIISSYLQDDEIACEDDVQVACEDGINADAKE 2075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04148 2075 Gene3D - 142 302 IPR027417 -
Vivi4g04148 2075 Gene3D Ribonuclease Inhibitor 1770 2029 IPR032675 -
Vivi4g04148 2075 Gene3D Ribonuclease Inhibitor 499 922 IPR032675 -
Vivi4g04148 2075 Gene3D Ribonuclease Inhibitor 930 1269 IPR032675 -
Vivi4g04148 2075 Pfam NB-ARC domain 158 389 IPR002182 GO:0043531
Vivi4g04148 2075 Coils Coil 40 60 - -
Vivi4g04148 2075 SUPERFAMILY L domain-like 465 1221 - -
Vivi4g04148 2075 SUPERFAMILY RNI-like 1768 2000 - -
Vivi4g04148 2075 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1068 1225 - -
Vivi4g04148 2075 SUPERFAMILY L domain-like 1288 1742 - -
Vivi4g04148 2075 Gene3D Ribonuclease Inhibitor 1329 1602 IPR032675 -
Vivi4g04148 2075 Gene3D - 309 396 IPR042197 -
Vivi4g04148 2075 SMART AAA_5 172 313 IPR003593 GO:0016887
Vivi4g04148 2075 SUPERFAMILY L domain-like 738 1110 - -
Vivi4g04148 2075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 406 IPR027417 -
Vivi4g04148 2075 Coils Coil 1765 1785 - -
Vivi4g04148 2075 Gene3D Ribonuclease Inhibitor 1606 1760 IPR032675 -
Vivi4g04148 2075 FunFam Probable disease resistance protein At1g61300 142 301 - -
Vivi4g04148 2075 PRINTS Disease resistance protein signature 248 262 - -
Vivi4g04148 2075 PRINTS Disease resistance protein signature 613 629 - -
Vivi4g04148 2075 PRINTS Disease resistance protein signature 342 356 - -
Vivi4g04148 2075 PRINTS Disease resistance protein signature 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04148 Vivi-Chr4 167116619 167134218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04148 172 681 WRKY Transcription Factor Family AT5G45050 22.750 7.82e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04148 - - psat:127092588 2720.27