Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04145 ATGGAAGATTGGAAACCAAAATTAAAAATGATTTTTGATAGCATTGAAGATGCTTGGAAGTTTTGGGTTAATTATGGCGGAAAGATTGGATTTGGGGTGAGGAAACAATATTCTCACAAGAACAAGAATGGTATAATTACTTCTTACAAGTTTGTTTGTTGTAAAGAAGGTATACGAAAACCAGATAAACGAGATTATAAAACGATCAATCCAAGGCCGGAGACCAGAACAAATTGTCAAGCAAGGTTAGGAATTAAGAATATGGATGGTAAGTTTATGGTCGTTGATTTTGTGGAAGAACATAATCACAATTTACATTTACAAGAAACAACTCATATGTTGCCATCTCAAAGGAAAGTCTCTCAAGTTCAATGTCAACAGATTGATCTAGCCGATGACGCGGGATTACAACAAAGGAAGTCATTTGACTTGATGAGTAAAGAAGTGGGGGGTAGAACTAATTTGGGATTTATTCGTCTTGATCAAAAGAATTATCTTCGGAAAAAAAGGCAAAGGAGTATGGTACATGGAGAAGCCGGTTATCTATTATATTTTGGTGATGTGATTTCTCTTGATTCAACATATTGCACAAATAGTTCACATAGACCACTTGCAGTATTCTCAGGGTTTAACCATCATCGTAAAGTTGTGATCTTTGGAGCTGCATTATTATATGATGAAACAATTGAGTCATACAAGTGGCTCTTTGAGACCTTTTTAGAGGCTCATAAGCAGAAAATGCCACAAACAGTTTTTACTGATCAAGATCATGCGATGGCAAGAGCACTAATGGAGGTTATGCCTGGAGCTTATCATGGCTTATGTACTTGGCACTTGATGCAAAATTGCATCAAGCACTTAGGAAATTTAATGAAAGATGGATCTCATTTTCTAAGTGACTTTAAGAAGTGCATGTATGAATATGAAAATGAAGACCAATTTGAAGAAGGTTGGAGAAATCTCCTTGTAAAATATGATGTGAAAGAAAATACTTGGTTACAAAGAGTGTACACTATAAAAGAGAAGTGGGCATCATGTTACATGAAGAAAGTTTTTACATTAGGTATGAGAAGCACTCAACTTAGTGAAAGTGTGAATGTGGGTATTAAAGGATTTATGAATGTGAACTTGGATATAATCAAATTTTTCAAGCGCTTTGAGGATGTTGTGGAAGAAAAACGATATAGTGAATTAAAGTGTGAATATGAAGCGCGACAAAAGATTCCAAGACTAAGGAACTCATATTCAAAAGTCTTGCAACAAGTGTCTGAGATTTATACTCCTAGTATTTTTGATCAATTCCAACACGAGTATGAGTTGTTTGAAACATGCTCTGTGAAAAACATTGATATTCAACCACCGTTAATTGATTGTGTTATTATCATGGAAAGTAATTTGGGTGAGTGGCAAGTGTCATTTGATTTGAATAAGAATTCAATTTGTTGCTCTTGTCGTAAGTTTGAGAGTTTCGGCATACTTTGTTGTCATTGTTTAAGACTATTTATTCACATGGATGTTAAATCAGTTCCAGAACAATATATCTTAAAAAGGTGGACAAAGTTAGCTAGAAGTGAGACTTCACGTAATGTTGAGGTTAACTATGTGGTGGAAGATGTTGACTTATCCCCAGCTCAACGCTACAAGGAGATTTGTCCTCGCCTTATTAGGATAGCCACTGAAGCGTGTAGAAATCCAGAAGCATTCAGTTTTCTTTGCAAAATCACTAATGAATTGGATAAGCACATACTCAAGTTTCAAAGCAATCCAATAAGTAGTTCTCAAGTGAATGAGTTTATCGGTGGAGTTAAAGAGTCTACTAGCAACCATGATGATTTGACACAAGCAAAGGGATTCAAAAAGAGAGAAGGCAAAAGGAGTTCAAAACGTCCAAAAGGCTGGGTAGAGCGCCAACCTCCCAAAAGAAAGAAAAATATTGGGTGTGATTCACAACTTCACGGAAAAGAAAAAGACAATGAAATAGGTGATTCACAAACACAAGTTCAATATGAGGTGCCCAATACAAGTGCATCTGTTTGGCTCAATAACTCTTACAATATACCATCCATGGAAAATAATAACACAAGTCAATTTGGTACCATTAGTTTTACTAGATTATTGATGGAAAATCTTCATGGAGATGCTTCAGCATTAACCAATTCATAG 2163 0.3546 MEDWKPKLKMIFDSIEDAWKFWVNYGGKIGFGVRKQYSHKNKNGIITSYKFVCCKEGIRKPDKRDYKTINPRPETRTNCQARLGIKNMDGKFMVVDFVEEHNHNLHLQETTHMLPSQRKVSQVQCQQIDLADDAGLQQRKSFDLMSKEVGGRTNLGFIRLDQKNYLRKKRQRSMVHGEAGYLLYFGDVISLDSTYCTNSSHRPLAVFSGFNHHRKVVIFGAALLYDETIESYKWLFETFLEAHKQKMPQTVFTDQDHAMARALMEVMPGAYHGLCTWHLMQNCIKHLGNLMKDGSHFLSDFKKCMYEYENEDQFEEGWRNLLVKYDVKENTWLQRVYTIKEKWASCYMKKVFTLGMRSTQLSESVNVGIKGFMNVNLDIIKFFKRFEDVVEEKRYSELKCEYEARQKIPRLRNSYSKVLQQVSEIYTPSIFDQFQHEYELFETCSVKNIDIQPPLIDCVIIMESNLGEWQVSFDLNKNSICCSCRKFESFGILCCHCLRLFIHMDVKSVPEQYILKRWTKLARSETSRNVEVNYVVEDVDLSPAQRYKEICPRLIRIATEACRNPEAFSFLCKITNELDKHILKFQSNPISSSQVNEFIGGVKESTSNHDDLTQAKGFKKREGKRSSKRPKGWVERQPPKRKKNIGCDSQLHGKEKDNEIGDSQTQVQYEVPNTSASVWLNNSYNIPSMENNNTSQFGTISFTRLLMENLHGDASALTNS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04145 720 MobiDBLite consensus disorder prediction 603 664 - -
Vivi4g04145 720 Pfam SWIM zinc finger 470 503 IPR007527 GO:0008270
Vivi4g04145 720 SMART 26again6 480 507 IPR006564 GO:0008270
Vivi4g04145 720 ProSiteProfiles Zinc finger SWIM-type profile. 469 505 IPR007527 GO:0008270
Vivi4g04145 720 Pfam MULE transposase domain 188 282 IPR018289 -
Vivi4g04145 720 MobiDBLite consensus disorder prediction 628 661 - -
Vivi4g04145 720 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 581 IPR031052 GO:0006355
Vivi4g04145 720 Pfam FAR1 DNA-binding domain 20 105 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04145 Vivi-Chr4 167066918 167069484 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi4g04145 MULE 5.6e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04145 - - mtr:112419426 1006.9