Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04124 ATGGGTTTTATTACCATCGTGTCAACCGTGTCAACCGCCACTTTATCTCTATCCCCACTCCATTTCTCCCGATACCCCTTTTCCATTTCTCTATCTCATTCTTCTTCTCATTACTCACCACCTTCCACTTCATCAACAAAAACACTCATTTCCCTCCTCACCACAAAATTCTCAGCAATGGATAATCCAAAAAGCTCTCAACTCAAAGAATCTCCATTAGGTATAGACGAAGAAACAGAACAACAATACGCACTTCACTCTAACCTACTTCAACAATTCACCGCTATCTCTTCTATCGACAAGGCATGGATTTTCAAATCAGACTTAGATTCTTCACAGGGAATGATGTTTTCCGTTAGTCAACCGAACCTTCTGGCTAACAAGAAACGGAAGTTGATTCTATCGTCTACCGTTACTAAACGGAGTGACGGTTCTGTTAATTTACAGTGGGCTCCGTTTCCGGTTGAGGTGTCTGGAGTTTCGGCTATTGTTCCGTCACCTTCTGGTTCGAAGCTTTTGATTGTTCGAAATCCTGAGAGTGATGGTCCTTCTCGGTTCGAAATTTGGAGCAACAGTTATCTTGAAAGGGAGTTTCATGTACCTCAATCTAAACATGGTTCTGTGTATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTCTGATGAAACTCATATAGCATATGTCGCTGAAGAGCCTTCCCCTGCAAAGCCTACATTCAATGATCTAGGCTACAAGAAAAGTGGTTCAGATGACAAGGATTCTAGTAGCTGGAAAGGTCAAGGAGACTGGGAAGAGGATTGGGGAGAAACATATGCGGGGAAGAGACAGCCTGCACTTTTTGTCATAAACATTTCTAGTGGAGAGGTACAAGCCGTCAAAGGAATTGACAAATCTTTGAGTGTTGGACAAGTTGTATGGGCTCCATCAAGTGAAGGCTCTGAACAATATTTGGTTTTTGTTGGCTGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCTTGTTCAATATATGTTGTTAAAGCACCGCACGAATCAAAAACCAATGAAAATGAGATCCACTCAACTGAAAATGCTCAGGCGCTTAACCTTACTCAAACCATAAGTAGTGCTTTCCTTCCACGGTTCAGCCCAGATGGAAAGTTTCTCGTATTTTTATCTGCAAGAAGTTCAGTTGATTCTGGGGCCCATTCTGCTACAAATTCACTTCATAGAATTGATTGGCCCAAGGATGTGAATTTCCATCAATCTGCAAAAGTTCATGATGTTATACCAGTTGTGCTGTGTGCTGAGGATGATGGCTTTCCCGGGCTTTACTTTTCAACTATCCTTAGTTATCCATGGCTTTCTGATGGCCATACTTTGGTTATTCCCTCTGTCTGGCACAGCCGTCAAGTTTTACTGTCTGTCGATGTGTTGAGTGGACAAGTAAGGCAAATCACCCCCGCAGACTCAAATTTCTCGTGGAGTCTCCTTACGTTACATGGGAACAATATTTTTGCTGTTTCTAGCAGTCCAGTAGATGTTCCACAGGTCAAGTATGGAACCTTTGTTGAGAAGGAAGCTGGTAATAATGAATGGAGTTGGTCGGATGTATCAAATCCCATATATAAATTCTCTGATAAGGTAAGTTCTTTGTTATCCTCTCTTACGTTCAGTGTAATGAAGATCTCAGTCAAGGATGCTTCCCAGAACCCAACTAAAGGCTCTGGTAAACCCTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAACTGACACATGTGATCCATTAATCGTGGTTCTTCACGGGGGACCGCACTCTGTCGCATTGTCAAGCTTTTCAAAGTCCCAGGCTTTTCTTGCTTCAATTGGATATAGCTTGTTGATTGTCAACTACAGAGGTTCATTAGGATTTGGCGAGGAAGCCTTACAATCTCTTCCGGGGAAAATTGGATCTCAGGATGTCAATGATGTACTCAATGCTATTGATCATGTCATAGAGTTGGGACTTGCCAGTCCATCAAAGATTGCGGTACTTGGTGGTTCACACGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCAGCTGCTAGAAATCCAGTTTGTAACCTTGCGCTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTTTGTGGAGACCTATGGAACCAATGGGAGGGATAGAATTACTGAAGCACCTTCAGCAGAGGATCTGACTCTATTTTATAGCAAATCTCCCATTGCACACATCTCAAAGGTAAAAACACCAACAATTTTTCTATTAGGTGCCCAAGATCTCCGCGTCCCAATTTCAACTGGACTGCAATTTGCTCGGGCTTTAAAGGAGAAAGAAGTACCGGTTAAAGTCATCGTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAATCCGACTTTGAAAGCTTCCTTAGCATTGCTGCATGGTTCAACAAGTACTGCAAATGA 2490 0.4233 MGFITIVSTVSTATLSLSPLHFSRYPFSISLSHSSSHYSPPSTSSTKTLISLLTTKFSAMDNPKSSQLKESPLGIDEETEQQYALHSNLLQQFTAISSIDKAWIFKSDLDSSQGMMFSVSQPNLLANKKRKLILSSTVTKRSDGSVNLQWAPFPVEVSGVSAIVPSPSGSKLLIVRNPESDGPSRFEIWSNSYLEREFHVPQSKHGSVYTDGWFEGISWNSDETHIAYVAEEPSPAKPTFNDLGYKKSGSDDKDSSSWKGQGDWEEDWGETYAGKRQPALFVINISSGEVQAVKGIDKSLSVGQVVWAPSSEGSEQYLVFVGWSFETRKLGIKYCYNRPCSIYVVKAPHESKTNENEIHSTENAQALNLTQTISSAFLPRFSPDGKFLVFLSARSSVDSGAHSATNSLHRIDWPKDVNFHQSAKVHDVIPVVLCAEDDGFPGLYFSTILSYPWLSDGHTLVIPSVWHSRQVLLSVDVLSGQVRQITPADSNFSWSLLTLHGNNIFAVSSSPVDVPQVKYGTFVEKEAGNNEWSWSDVSNPIYKFSDKVSSLLSSLTFSVMKISVKDASQNPTKGSGKPYEAIFVSSKTKKTDTCDPLIVVLHGGPHSVALSSFSKSQAFLASIGYSLLIVNYRGSLGFGEEALQSLPGKIGSQDVNDVLNAIDHVIELGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCFVETYGTNGRDRITEAPSAEDLTLFYSKSPIAHISKVKTPTIFLLGAQDLRVPISTGLQFARALKEKEVPVKVIVFPNDVHGIERPQSDFESFLSIAAWFNKYCK 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04124 829 SUPERFAMILY DPP6 N-terminal domain-like 158 515 - -
Vivi4g04124 829 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 79 350 IPR045550 -
Vivi4g04124 829 Gene3D alpha/beta hydrolase 520 828 IPR029058 -
Vivi4g04124 829 Pfam Prolyl oligopeptidase family 612 828 IPR001375 GO:0006508|GO:0008236
Vivi4g04124 829 MobiDBLite consensus disorder prediction 239 264 - -
Vivi4g04124 829 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 76 828 - -
Vivi4g04124 829 FunFam Acylamino-acid-releasing enzyme 568 828 - -
Vivi4g04124 829 SUPERFAMILY alpha/beta-Hydrolases 581 828 IPR029058 -
Vivi4g04124 829 MobiDBLite consensus disorder prediction 246 264 - -
Vivi4g04124 829 Pfam WD40-like Beta Propeller Repeat 377 399 IPR011659 -
Vivi4g04124 829 Gene3D - 273 398 IPR015943 GO:0005515
Vivi4g04124 829 ProSitePatterns Prolyl endopeptidase family serine active site. 657 687 IPR002471 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04124 Vivi-Chr4 166414879 166426181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04124 596 812 Carbohydrate Esterase AT5G36210 25.806 5.35e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04124 K01303 - gmx:100803600 1233.78