Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04122 ATGCAGTTTGAGGAAGAACAACAGTATGCTTCTCTCTCTAACTTACTTCCACACTTCACCACCATTCCCACCATTCACAAAGCATGGCTTTTCAACAATACACTAGGAATATTTTCTTTTACCCAACCTCATCTTTTAACAAACCAAACCAAAACTTCAATTCTCTCCTGTGAAGTTCTTAAACAAGAAACTGATGTTAAGTTTCAGTGGGCTCCGTTTCCAATTCAGATGTCCGGTGTTGTTTCTATGATTGTTCCGTCTCCTTCTGGTTCTAAGCTTTTGGTGATTCGGAATCCGGAGATTAAAGAAGATGATGCTAGTTCTTGTTTTCAGATTTGGAGTTCGTCTTGCTTGGAGAAGGAGTTTCATGTTCCTCAAACAATGCATGGTTCTGTTTATAATGATGGATGGTTTGAGGGTGTTTCTTGGAACTTGGATGAAACATTGATAGCATATGTAGCAGAAGAGCCCTCTTCTACAAGGCCAGTATTTAACAATATGGGTTACATGAAAGGGGGTTGTGCAGAGAAGGATTTTGGTAGTTGGAAAGGTCAAGGAGTCTGGGAGGAGGATTGGGGAGAAACATATTCTGCAAAGAGACGGCCTACACTTTTTGTTATCAACGTCAACAGTGGAGAGGTACAAGCTGTCAAAGGAATTGACAAATCTTTGAGCATTGGCCAAGTTGTCTGGGCTCCATGTACCGAAAGCTCGAATCAGTGTCTTGTTTTTGTCGGGTGGTCATCTGAGGCAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTGCATTGTATGCGGTTAGAGCACCACATCATGAGTCAAAACCCGAGAAACCAGAGCACCACTCAACTGAAGAATTGCATGCACTGAATCTAACTCCAACAATAAGTAGTGCTCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTTCTTGTATTTTTATCTGCAAAAAGTGCTGTGGATTCAGGAGTGCACAATGCTACAAATTCACTTCATAGGATTGATTGGCCAACTGATGGGAAACTGTACCAATCCGCCAAAATTCACGACGTCATTCCTGTTGTAATGCGTGCTGAGGATGGTTGTTTCCCCGGGCTTTATTGTACAGCTATCCATGATAATCCTTGGCTTTCCGACAACTGCACAATGATCATATCATCCATATGGCACAGCTGTGAAGTTCTACTTTCTGTGAATGTGTTGAGTGGGGAAGTATTACGTATCAGCCCAGAAGACTCAAATTTCTCGTGGAATCTTCTTACACTGAATGGGAACAATATTCTCGCCATTTCCAGCAATCCGGTCAATGTTCCTCAAATTATGTATGGAATGGTCGTTGAGAAGGCAAAGAGAAATACTACATGGAATTGGTCAAAGATATCTAGTCCCATATTCAAATGTTCTGACAAGGTTACAACTTTGCTGTCCTCTCTCCAGTGCAGTATACTGAAGATTTCAGTCACAGATGCTTCCAACGATCCAATAAAAGGTGCTGATAAACCTTTTGAAGCCATATTTGTATCATCCAAAACCATGAACAAGGATTTATGTAATCCATTAATTGTGATCCTTCATGGAGGGCCTCAAGACGTCTCTTTGTCACACTTCTCTAAGTCTTGGGCGTTTCTATCTTCGATTGGATATAGCTTGTTGATTGTAAATTACAGAGGTTCATTAGGATTTGGCGAGGAAGCACTACAGTCTCTTCCAGGGAAAGTTGGATCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTGATCAACTTGGGTCTTGCCAGTCCATCCAAGATTACGGTGATGGGAATTTCACATGGTGGTTTTTTGACGACTCATTTGATTGGCACCAGAGAAGTTTGTAGCAGTTGCAGCAATTAA 1887 0.416 MQFEEEQQYASLSNLLPHFTTIPTIHKAWLFNNTLGIFSFTQPHLLTNQTKTSILSCEVLKQETDVKFQWAPFPIQMSGVVSMIVPSPSGSKLLVIRNPEIKEDDASSCFQIWSSSCLEKEFHVPQTMHGSVYNDGWFEGVSWNLDETLIAYVAEEPSSTRPVFNNMGYMKGGCAEKDFGSWKGQGVWEEDWGETYSAKRRPTLFVINVNSGEVQAVKGIDKSLSIGQVVWAPCTESSNQCLVFVGWSSEARKLGMKYCSNRPCALYAVRAPHHESKPEKPEHHSTEELHALNLTPTISSALFPRFSPNGEFLVFLSAKSAVDSGVHNATNSLHRIDWPTDGKLYQSAKIHDVIPVVMRAEDGCFPGLYCTAIHDNPWLSDNCTMIISSIWHSCEVLLSVNVLSGEVLRISPEDSNFSWNLLTLNGNNILAISSNPVNVPQIMYGMVVEKAKRNTTWNWSKISSPIFKCSDKVTTLLSSLQCSILKISVTDASNDPIKGADKPFEAIFVSSKTMNKDLCNPLIVILHGGPQDVSLSHFSKSWAFLSSIGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTHLIGTREVCSSCSN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04122 628 Gene3D alpha/beta hydrolase 495 625 IPR029058 -
Vivi4g04122 628 ProSitePatterns Prolyl endopeptidase family serine active site. 582 612 IPR002471 GO:0004252|GO:0006508
Vivi4g04122 628 Pfam Prolyl oligopeptidase family 537 618 IPR001375 GO:0006508|GO:0008236
Vivi4g04122 628 SUPERFAMILY DPP6 N-terminal domain-like 76 440 - -
Vivi4g04122 628 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 276 IPR045550 -
Vivi4g04122 628 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 5 619 - -
Vivi4g04122 628 SUPERFAMILY alpha/beta-Hydrolases 517 618 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04122 Vivi-Chr4 166396112 166400603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04122 521 622 Carbohydrate Esterase AT5G36210 31.373 2.52e-09 58.5