Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04113 ATGACATCAATAGTGAGGAAGACAAGCATATCACCAAGAAACTCATGGATTAAGCTGGATATTAATGGACATAGTTCCATACTTGATGTGGACAAGTATGAACTTATGCGTCAAGTTCGCGTCGATGCCCGTGATCTTAGAATTCTTGATCCTATTCTGGCTTACCCTTCTGCCATTTTAGGAAGAGAAGAGGTTATTGTTATTAACTTGGAGCATATCAAGGCAATCATCACAGCTAAAGAGGTTTTTTTGCTAGACCCAACAGATGAAGATGTTGTCCCTGTTGTTAGAGAACTACAAAGGAGATTGTTTGCCATTGACACAAATCAGAGAGATGATCAAAATAGTGGTTCACTTGAAGTTGAAGTAGATGAAGATGATGATTTACCTTTCGAATTCCGAGCATTAGAGATATTTCTTGAAGCAATTTGTAGCTTCCTTGATGCAAGAGTTGCAGATCTGGAGATGGATACTTATCCTACATTAGATGAACTTACTACCATGATCAGTGGTCAAAATTTGGACAAAATTCGTAAGTTGAAGAATAAAATAACAAGGCTGACTGCTAGAGTTCAAAAGGTAAGAGAAGAGATTGAACACTTAATGGATGATGATGAAGACATGGCTGACTTATACTTATCAAGAAAATTGATATCTGCATTATCACCTATAAGTCACTCAGGTGCTTCATCTCCCACCACAAAATCCAAAAGTGTGGCAACATATCTTAGAGATGAAAATGATGTGGATGAGATTGAAATGCTACTAGAGGCTTATTACATGCAAATTGATGGAACTTTGGATAGATTGTATACTTTACGGGGATATATTGATGATACTGAAGATTACATGAATATTCAGATTGACAACATTCGAAATCAGTTAATTCAGTTAGAGTTATTTCTTAACTCAGCAGATCTTTCCCTTGCATTTTATTCATTAGTGACTGGAATACTTGGCATGAATATTCAATATTCTTGGCAAGAAGATCATGATTACATGTTCAAATGGGTGTGTATTTTTACAGCAATTGTTGCCATTTCTATATTTCTCATCATAGTTGGCCATGCTCGCAAAAAGGGTTTGGTTGGATTCATGAACAACTGA 1107 0.3613 MTSIVRKTSISPRNSWIKLDINGHSSILDVDKYELMRQVRVDARDLRILDPILAYPSAILGREEVIVINLEHIKAIITAKEVFLLDPTDEDVVPVVRELQRRLFAIDTNQRDDQNSGSLEVEVDEDDDLPFEFRALEIFLEAICSFLDARVADLEMDTYPTLDELTTMISGQNLDKIRKLKNKITRLTARVQKVREEIEHLMDDDEDMADLYLSRKLISALSPISHSGASSPTTKSKSVATYLRDENDVDEIEMLLEAYYMQIDGTLDRLYTLRGYIDDTEDYMNIQIDNIRNQLIQLELFLNSADLSLAFYSLVTGILGMNIQYSWQEDHDYMFKWVCIFTAIVAISIFLIIVGHARKKGLVGFMNN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04113 368 Coils Coil 177 204 - -
Vivi4g04113 368 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 308 352 IPR045863 -
Vivi4g04113 368 FunFam Magnesium transporter MRS2-5 96 295 - -
Vivi4g04113 368 CDD Mrs2_Mfm1p-like 16 362 IPR039204 -
Vivi4g04113 368 FunFam Magnesium transporter MRS2-1 4 87 - -
Vivi4g04113 368 Gene3D - 3 87 - -
Vivi4g04113 368 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 362 IPR039204 -
Vivi4g04113 368 Gene3D Magnesium transport protein CorA, transmembrane region 94 295 - -
Vivi4g04113 368 Gene3D Magnesium transport protein CorA, transmembrane region 307 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04113 Vivi-Chr4 166228547 166233741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04113 2 338 MRS2 Gene Family AT5G64560 59.718 9.16e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04113 K16075 - fve:101295857 440.654