Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04111 ATGGATCCTTTTTTTCCTGAGAATCTTCTTCTAGGTGATGTTTTTTGGGATGAACAACCTCTTCTTTCAACAAGTAATTTTGTTCAAACACAACCTTGTCCTATACAAAATCCAAGTGCTTTTGTTCAATATAGAGACCAACAACCCAAGATTAGTTTAGGAAAACAAAGTTCTTTAAAAGGCTCCAATTCACATTCCATGAACAAGAGAATGTTTGCATTTTTGAGAAAAAGTTTGCCGGTAGAGAGAAGTAAAGTAGCTGATTGCGAAAGAGAACGTGGCTTCAAACACATGATTAGTGAAAGAATGAGAAGACAAAGACAGAGACAGTGTTGCCTCAACTTACATTCAGTTTTACCTCATGGAACCAAAACAGATAATAATTCAGTAGTTCAAACAGCAGCTAAGGAAATTAGAAGGCTGCAAGGATACAAAGAGGAATTAGAGAGGAAAAACTTTGTGCTCGAAGGAAATATCGAGGAAAGAAAATTGCAGCATTTGAGAGTGACATATTCATCTACATCTGGAATTGATTCTATAGTTGAGACACTAAAATTGTTGAAAGGACATGGTGTGGATACTAGAAGGATCAAGACAGATTTTTCTCATCAGGAATTTTTTGCAGTCTTGGAGATAGAAACTGAGATTGGAGAAGATGATGTGGCAGATGCTGTTAAGAGAACACTTGATGAACTTGAGTGGAAGTTTCATTCTCATGTCCAAGAAGGTTCTCAAAAGCAAATATTACATCCATTTTAA 759 0.3597 MDPFFPENLLLGDVFWDEQPLLSTSNFVQTQPCPIQNPSAFVQYRDQQPKISLGKQSSLKGSNSHSMNKRMFAFLRKSLPVERSKVADCERERGFKHMISERMRRQRQRQCCLNLHSVLPHGTKTDNNSVVQTAAKEIRRLQGYKEELERKNFVLEGNIEERKLQHLRVTYSSTSGIDSIVETLKLLKGHGVDTRRIKTDFSHQEFFAVLEIETEIGEDDVADAVKRTLDELEWKFHSHVQEGSQKQILHPF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04111 252 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 227 IPR044658 -
Vivi4g04111 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 157 IPR036638 GO:0046983
Vivi4g04111 252 Coils Coil 131 165 - -
Vivi4g04111 252 SMART finulus 98 147 IPR011598 GO:0046983
Vivi4g04111 252 Pfam Helix-loop-helix DNA-binding domain 97 142 IPR011598 GO:0046983
Vivi4g04111 252 Gene3D - 85 158 IPR036638 GO:0046983
Vivi4g04111 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 141 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04111 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.470 1.55e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04111 - - gmx:100815874 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04111 4 166186004 166187200 Vivi4g04111 4 166186004 166187200 ECH