Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04103 ATGGCTCAATCTCTTTTATTCACAGTGAAGAGACGTGCCCCTGAATTAGTTACTCCATCCAAACCCACACCTCGTGAAATAAAATTACTCTCAGACATTGACGACCATGATATATTACGTTTCCATATTCCTGGTATACAATTTTACAAGTACGAACCCATAATGACAGGAAAAGATCCGGTTGATGTTATTAGAAAAGCACTTGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGAGAAGGAGCTGGTAGAAAACTTATGGTTGATTGTACTGGAGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTACTCTTAAAGATTTCGGTGATGTTTTTCTTCCTCCATTTCCTTGCTTGGATGAGCTTCTTTATGATGTTCCAGGTTCTTCAAACGTCCTTAACGCTCCATTGTTGCTTATTCAGGTAACACGCCTCAAGTGTGGTGGTTTCATCTTAGCTCTTCGTATGAACCATACAATGAGTGATGGATCAGGTATAGTTCAGTTCCTGAATGCCTTGGCTGATATATCTCGCGGGATGAATGAACCTTCAATCTCACCGGTGTGGTGCCGAGAGCTTCTAAGCGCAAGAGACCCACCAAGAGTGACATGTATTCATCCTGAAATTGAACAGGAACCTGGTAACAACAAAACCATAATCTTATCCTTATTAGACAACATGGTCCGACGCACTTTCTTCTTTGGTCCGGCCGAGGTAGCCAAAATTCACTCTCTCCTTCCGACCAACATGATACACCAGTACACCAAATTTGAAATCATCACCGCATTTGTTTGGCGTTGTCGTACAATAGCGTTACAATCGGATTCAGACGAAGAAGTTCGTATGATGAGCGTAGTCAATGCACGTAGCAGATTGTTTAACCTAAAACTACCAAATGGTTACTATGGTAATGTTATTGTGTATTCTGTTGCAGTGACATCAGCAAGAAAATTAATTGAAAATCCATTGGAGTATGCATTGAATTTAATTCAGAAATCAAAAGCTAATGTCACCAAAGAGTATATCCATTCTTTAGCCGACTTAATGGTTATCAAAGGTCGACCTAGTCTTTCCCTGAGGGGATTGTTTGGAGTATCCAATATTACACATGCTGGAATTAAAGATGTTGATTTTGGTTGGGGGAAACCTGTTTATGGTGGACCAGCTAAAGATAGTTCATTTCCTGGCATTGTTAGTTACTACTTACCATTTAAAAACGGTAAAGGAGAGAATGGTTTGGTTTTACCGCTTCATTTGCCAGCTCATGCCATGGAGAGGTTTGTTCAAGAGTTAGATAGTGTTATTAAGGGTGATTCAACATCTCGTATCATTAAATCGTTGTTGTAG 1362 0.3957 MAQSLLFTVKRRAPELVTPSKPTPREIKLLSDIDDHDILRFHIPGIQFYKYEPIMTGKDPVDVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLKDFGDVFLPPFPCLDELLYDVPGSSNVLNAPLLLIQVTRLKCGGFILALRMNHTMSDGSGIVQFLNALADISRGMNEPSISPVWCRELLSARDPPRVTCIHPEIEQEPGNNKTIILSLLDNMVRRTFFFGPAEVAKIHSLLPTNMIHQYTKFEIITAFVWRCRTIALQSDSDEEVRMMSVVNARSRLFNLKLPNGYYGNVIVYSVAVTSARKLIENPLEYALNLIQKSKANVTKEYIHSLADLMVIKGRPSLSLRGLFGVSNITHAGIKDVDFGWGKPVYGGPAKDSSFPGIVSYYLPFKNGKGENGLVLPLHLPAHAMERFVQELDSVIKGDSTSRIIKSLL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04103 453 PANTHER ACYL TRANSFERASE 4 7 438 - -
Vivi4g04103 453 Gene3D - 227 436 IPR023213 -
Vivi4g04103 453 Gene3D - 8 218 IPR023213 -
Vivi4g04103 453 Pfam Transferase family 9 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04103 Vivi-Chr4 166002778 166008884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04103 12 394 Monolignol Biosynthesis Gene Families AT5G48930 32.828 1.31e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04103 K19861 - gmx:100797017 590.882