Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04102 ATGGCTCAATCTCTGTTATTCACAGTGAAGAGACGTGCCCCTGAGTTGGTCATTCCATCTAAACCCACACCTCGTGAAATAAAATTACTCTCAGACCTTGATGACCATGATACCTTACGTTTTCATATTGCTGGCATACAATTTTACAAGTATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTGCGAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGAGAAGGTGTTGGTAGGAAACTTATGGTTGATTGTACTGGAGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTTCTCTTAAAGATTTCGGTGATAATCTTCTTCCTCCATTTCCTTGCTTGGATGAGCTACTTTATGATGTTCCTGGTTCTTCAGACTTGCTTAATGCTCCATTGCTGCTTATTCAGGTTACACGCCTCAAGTGTGGTGGTTTCATTTTAGCTCTTCGAATGAACCATACGATGAGTGATGCATACGGTATAGTTCAATTCATGAATGCCTTAGCTGAAATATCTCGCGGGATGAATGAACCTTCAATCTCACCAGTGTGGTGCCGAGAGCTTCTAAGCGCAAGAGATCCACCAAGAGTGACATGTATTCATCCTGAAATCGAACAGGAACCTGGTAACAATGAAGCCATAATCATATCCTTATTAGACAACATGGTCCAACGCACTTTCTTCTTTGGACCGGCCGAGGTAGCCAAAATTCACTCTCTCCTTCCGACCAACATGATACACAAGTACACCAAATTTGAAATCATCACTGCATTTGCTTGGCGTTGTCGTACAATAGCGTTACATCCAGATTCAGACGAAGAAGTTCGTATGATAAGCGTAGTCAATGCACGTAGCACATCGTTTAACCTACAACTACCAAATGGTTACTATGGTAATGTTATTGTGTATTCTGTTGCAGTGACATCAGCAAGAAAATTAATTGAAAATCCATTGGAGTATGCATTGAATTTAATTCAGAAATCAAAAGCTAATGTCACCAAAGAGTATATCCATTCTTTAGCCGACTTAATGGTTATCAAAGGTCGACCTAGTTTTTCCTTAAAGGGATTGTTTGCAGTATCCAATGTTACACATGCTGGAATTAAAGATGTTGATTTTGGTTGGGGGAAAGCTGTTTATGGTGGACCAGCCAACGATAGTTCTTTTCCTGGCATTGTTAGTTACTACTTACCATTTAAAAACGGTAGAGGAGAGAAAGGTTTGGTTTTACCGCTTCGTTTGCCAGCTCATGCCATGGAGAGGTTTGTTGAAGAGTTAGATAGTGTTCTTAAGAATAGCATTAACAATCCTACTAAGGGTGATCCAACATCTCCTATCATTAAATCGTTGTTGTAG 1386 0.3968 MAQSLLFTVKRRAPELVIPSKPTPREIKLLSDLDDHDTLRFHIAGIQFYKYDPNMAGKDPVDVIRKALAKTLVFYYPFAGRLREGVGRKLMVDCTGEGVLFIEADADVSLKDFGDNLLPPFPCLDELLYDVPGSSDLLNAPLLLIQVTRLKCGGFILALRMNHTMSDAYGIVQFMNALAEISRGMNEPSISPVWCRELLSARDPPRVTCIHPEIEQEPGNNEAIIISLLDNMVQRTFFFGPAEVAKIHSLLPTNMIHKYTKFEIITAFAWRCRTIALHPDSDEEVRMISVVNARSTSFNLQLPNGYYGNVIVYSVAVTSARKLIENPLEYALNLIQKSKANVTKEYIHSLADLMVIKGRPSFSLKGLFAVSNVTHAGIKDVDFGWGKAVYGGPANDSSFPGIVSYYLPFKNGRGEKGLVLPLRLPAHAMERFVEELDSVLKNSINNPTKGDPTSPIIKSLL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04102 461 PANTHER ACYL TRANSFERASE 4 7 439 - -
Vivi4g04102 461 Gene3D - 8 216 IPR023213 -
Vivi4g04102 461 Pfam Transferase family 9 436 - -
Vivi4g04102 461 Gene3D - 227 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04102 Vivi-Chr4 165983219 165984871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04102 40 436 Monolignol Biosynthesis Gene Families AT5G48930 29.952 2.92e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04102 K19861 - gmx:100797017 602.438