Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04101 ATGGCTCAATCTCTGTTATTCAAAGTAAAAAAGTGTACCCCTGAATTTGTCACTCCATCAAAACCCACACCTCATGAAATCAAACTTCTCTCCGACATTGATGACCAAGATGGGTTACGTTTGCAAATTCCACTGATACAGTTTTACAAATATGATCCAAATATGGAAGGGAAAGACCCCGTTGATGTTATTAGAAAAGCACTTGCTAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGAGAAGGTGTTGGTAAGAAACTTATAGTTGATTGTACTGGAGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGTTTGAGAGATTTTGGTGATACTCTTCTTCCTACATTTCCTTGCCTGGATGAGCTTCTTTATGATGTTCCTGGTTGTTCAAACGTGCTTAACGCTCCATTGCTGCTTATTCAGGTAACACGGCTCAAGTGTGGTGGTTTCGTTTTTGCTATTCGTTTAAACCATACAATGAGTGATGCATCTGGTATAGTTCAATTCATGAATGCCTTAGCTGAAATATCTCGCGGGAGGAATGAACCTTCAATCTCTCCGGTGTGGTGCCGAGAGCTTCTAAACGCAAGAGACCCACCCAGAGTGACCTGTATTCATCCTGAAATAGAACATGAGCCTGTAAACAACAACGGAACCATCATATCCTTAGACAACTTAGTCCAACGCACTTTCTTCTTTGGTCCGGTTGAGGTATCCAAAATTCACTCTCTCCTTTCTACCAACATGGTATACAAGTACACCAAATTTGAAATCATCACCACATTTATTTGGCGTTGTCGTATAATAGCGTTACAACCAGATTTAGACGAAGAAGTTCGTATGATGAGCGTAGTCAATGCACGTGGCACATCGTTTAACCTACAACTGCCAAATGGTTACTATGGTAATGTTATTGCGTATACTGTTGCAGTGACATTAGCAAGAAAATTAATTGAAAATCCGTTGGAGTATGCATTAAATTTAATTAAGAAATCAAAAGCTAATGTCACCAAAGAGTATGTGTATTCATTGATAGATTTAATGGTTATCAATGATCGACCTAGATTTTCCATGAGGGGATTGTTTGTAGTGTCAAATCTTAGACATTCCGGATTTGAAGATGTTGATTTTGGTTGGGGGAAAGCTGTTTATGGTGGACCAGCTAATGATAGTTCTTTTCCTGGCATTGTTAGTTACTACTTACCATTTAAAAATGCTAAAGGAGAGAAAGGTTTGGCTATACCAATGCATTTGCCAGCACAAGCAATGGAGAGGTTTGTTAAAGAGTTAGATAGTGTGCTTAAGAATAATATTAACCAGGGTGATCCAACATCTCGTATCATTAAATCGTTGTTGTAG 1374 0.3843 MAQSLLFKVKKCTPEFVTPSKPTPHEIKLLSDIDDQDGLRLQIPLIQFYKYDPNMEGKDPVDVIRKALAKTLVFYYPFAGRLREGVGKKLIVDCTGEGVLFIEADADVSLRDFGDTLLPTFPCLDELLYDVPGCSNVLNAPLLLIQVTRLKCGGFVFAIRLNHTMSDASGIVQFMNALAEISRGRNEPSISPVWCRELLNARDPPRVTCIHPEIEHEPVNNNGTIISLDNLVQRTFFFGPVEVSKIHSLLSTNMVYKYTKFEIITTFIWRCRIIALQPDLDEEVRMMSVVNARGTSFNLQLPNGYYGNVIAYTVAVTLARKLIENPLEYALNLIKKSKANVTKEYVYSLIDLMVINDRPRFSMRGLFVVSNLRHSGFEDVDFGWGKAVYGGPANDSSFPGIVSYYLPFKNAKGEKGLAIPMHLPAQAMERFVKELDSVLKNNINQGDPTSRIIKSLL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04101 457 PANTHER ACYL TRANSFERASE 4 7 438 - -
Vivi4g04101 457 Pfam Transferase family 8 435 - -
Vivi4g04101 457 Gene3D - 221 435 IPR023213 -
Vivi4g04101 457 Gene3D - 7 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04101 Vivi-Chr4 165967939 165969387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04101 40 435 Monolignol Biosynthesis Gene Families AT5G48930 29.469 1.00e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04101 K19861 - gmx:100797017 596.66