Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04099 ATGGCCCAATCCCTGAGATTCACAGTGAAAAAGCGTGCACCTGAATTTGTAATTCCGTCAAAACCAACACCTCATGAAATCAAACTTCTCTCTGACATTGATGACCAAGATGGATTACGTTTTCAAATTCCAGTGATACAATTTTACAAGTATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTGCGAAAACGCTTGTGTTTTATTATCCATTTGCAGGTAGACTGAGGGAAGGTCCTGGCAGGAAACTTATGGTGGATTGTAATGAAGAAGGTGTATTGTTCATTGAAGCTGACGCTGATGTTAGTTTGAAAGATTTTGGTGAAGCTATTCATCCTCCATTTCCTTGTTTGGATGAGCTTCTCTTTGATGTTCCTGGTTCTTCAGATGTGATTAATACTCCACTGCTGCTTATTCAGGTCACACGCCTCAAGTGTGGTGGTTTCATTTTTGCTCTTCGTCTAAACCATACAATGAGCGACGCATCGGGTTTAGTTCAATTCATGAACGCCTTAGGAGAAATATCTCGCGGGATGAGCAAACCTTCAATCTCACCAGTGTGGTGTAGAGAGCTTCTTAACGCAAGAGATCCCCCAAGAGTAACATGCACTCATCATGAATACGAAAAATCACCTGATAACAAAGGAACCATCTTTCCCTTACACAACATTGTTCATCACACTCTCTTCTTTGGTCCCACCGAGGTAGCCGCAATTCGCACTCTTCTTCCATCTCACCAACGACAGCAACATTCCAATTTCGAAATCATCTCCGCTTACCTTTGGCGCTATCGTACAATAGCATTACAATTACCTACTAACCAAGAAGTTCGGATAATATGCGTAGTCAATGCGCGTAGCAAATCAGTAAACCTGCCATTACCAAAAGGTTACTACGGTAACACCTTGGCAAAACCTGCGGCAGTTACAACAGCAGGAAAACTAATTGAAAATCCATTGGTTTACGCGTTGAGTTTAGTAAAGAAAGCAAAAGCTAGTGTCACACAAGAGTATATGCATTCGGTTGCAGACTTAATGGTGATCAAGAGTCGACCTCACTTTACTATCGTGGGATCGTATCTAGTGACTGACGTGACACGCGCTGGATTTAGAGAGGTTGATTTTGGTTGGGGGAATGCTGTTTATGGAGGACCTGCTAGAGCAGGAGAAGGTGGTATTCCTGGACTTGCTAGCTTTCATTTACCTTTTAAAAATGCTAAAGGAGAAGAAGGGTTGGTTATACCGTTTTTTCTACCAAGTCTAGTCATGGAGAGGTTTATAAAAGAGGTTGATAGTGTACTTAAGAGAAACATTAATCAATGTATTAAGGGTGATTCAAAATCTAGTATCATTATTTCTTCAATGTAG 1386 0.4105 MAQSLRFTVKKRAPEFVIPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPNMAGKDPVDVIRKALAKTLVFYYPFAGRLREGPGRKLMVDCNEEGVLFIEADADVSLKDFGEAIHPPFPCLDELLFDVPGSSDVINTPLLLIQVTRLKCGGFIFALRLNHTMSDASGLVQFMNALGEISRGMSKPSISPVWCRELLNARDPPRVTCTHHEYEKSPDNKGTIFPLHNIVHHTLFFGPTEVAAIRTLLPSHQRQQHSNFEIISAYLWRYRTIALQLPTNQEVRIICVVNARSKSVNLPLPKGYYGNTLAKPAAVTTAGKLIENPLVYALSLVKKAKASVTQEYMHSVADLMVIKSRPHFTIVGSYLVTDVTRAGFREVDFGWGNAVYGGPARAGEGGIPGLASFHLPFKNAKGEEGLVIPFFLPSLVMERFIKEVDSVLKRNINQCIKGDSKSSIIISSM 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04099 461 Gene3D - 213 435 IPR023213 -
Vivi4g04099 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 432 - -
Vivi4g04099 461 Pfam Transferase family 8 436 - -
Vivi4g04099 461 Gene3D - 8 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04099 Vivi-Chr4 165948576 165950422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04099 40 436 Monolignol Biosynthesis Gene Families AT5G48930 30.193 2.19e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04099 K19861 - gmx:100797017 662.529