Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04097 ATGGCACAGCCTCTCTTATTCACAGTGAAGAGACGTGCACCTGAATTTGTAACTCCCTCAAAACCAACACCTCATGAAATCAAACTTCTCTCTGACATTGATGACCAAGATGGGTTACGTTTCCAAATTCCAGTGATACAATTTTACAAGTATGATCCAAATATGGCAGGGAAAGACCCTGTTGATGTTATTCGAAAAGCACTTGCGGAAACGCTTGTGTTTTATTATCCATTTGCTGGTAGGTTGAGGGAAGGTCCTGGTAGGAAACTTATGGTGGATTGTAATGAAGATGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGTTTGAAGGATTTTGGTGATGCTCTTCAGCCTCCTTTTCCTTGTTTGGAGGAACTTCTTTTTGATGTTCCTGGTTCTTCGGAAGTGCTTAATACTCCAGTGATGGTTATTCAGGTAACGCGTCTCAACTGCGGCGGTTTCATTTGTGCTCTACGCCTAAACCATACAATGAGCGATGCAGCAGGTTTAACCCAATTCATGAGCGCTTTAGGCGAAATATCTCGCGGAATGAAACAACCTTCAATTCCACCACTCTGGCAAAGAGAGCTTCTCGATGCAAGAAACCCACCAAGAGTAACATGTACTCATCGTGAATACGAACAATTACCTGACCCTAAAGGAACCATCATCCCCTTAGACGACATGGCTCACCGCTCCTTCTTCTTCGGCCCCACCGAACTCGCCGCAATTCGCGCCCTCCTTCCGCCTCACCAACAAAAACGCTCCAATTTCGAAACCCTAACCGCATGCCTATGGCGTTGTCGCACAATCTCGTTACAGCCAGATGCAGACGAAGAAGTTCGTATAATCTGCATCGTTGATTCACGGAGCAAATTTAATCCACCTTTACCAAAAGGTTTCTACGGTAACGCTTTTGCATTTCCCGTCGCTGTTACAACGGCGGGAAAGCTAATAAAAAATCCAATGGGATACGCATTGGAGTTAGTTCAAAAAGCAAAAAGTGACGTCACTCAAGAGTATATGCATTCGGTTGCAGATTTAATGGTTCTCAAGGGACGACCTCATTTTACTGTGCTGAGGTCGTTTCTTGTGTCTGACGTGACACGTGCTGGGTTTGGAGATGTTGATTTTGGTTGGGGAAAAGCTTTTTATGGTGGACCAGCTAAAGGAGGAGTTGGTGCTGTTCCTGGTGTTGCTAGCTTTTATATACCTTTTGTAAATGGTAAAGGAGAGAAAGGTTTGGTTATTCCGGTTTGTTTGCCAGCTCAAGCTATGGAGAGGTTTGTTGTAGAGTTGGATAGTGTGCTTAACAACAATGTTAACAAACCTACTCAGAGTGGTCCAGGATCTGCTTTCATTACTTCTTCTTTGTAG 1380 0.4399 MAQPLLFTVKRRAPEFVTPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPNMAGKDPVDVIRKALAETLVFYYPFAGRLREGPGRKLMVDCNEDGVLFIEADADVSLKDFGDALQPPFPCLEELLFDVPGSSEVLNTPVMVIQVTRLNCGGFICALRLNHTMSDAAGLTQFMSALGEISRGMKQPSIPPLWQRELLDARNPPRVTCTHREYEQLPDPKGTIIPLDDMAHRSFFFGPTELAAIRALLPPHQQKRSNFETLTACLWRCRTISLQPDADEEVRIICIVDSRSKFNPPLPKGFYGNAFAFPVAVTTAGKLIKNPMGYALELVQKAKSDVTQEYMHSVADLMVLKGRPHFTVLRSFLVSDVTRAGFGDVDFGWGKAFYGGPAKGGVGAVPGVASFYIPFVNGKGEKGLVIPVCLPAQAMERFVVELDSVLNNNVNKPTQSGPGSAFITSSL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04097 459 Gene3D - 214 432 IPR023213 -
Vivi4g04097 459 Gene3D - 8 213 IPR023213 -
Vivi4g04097 459 Pfam Transferase family 9 432 - -
Vivi4g04097 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04097 Vivi-Chr4 165891209 165893855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04097 40 434 Monolignol Biosynthesis Gene Families AT5G48930 29.496 8.18e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04097 K19861 - gmx:100797017 738.413