Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04086 ATGGATGAGATTTCGTCTTCCACAAATGTCACTCAAGATGTTGGTTCAATCTCTGGTGAAAATAAAGAATCGTGGCAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTATGCTAAATACGCTCATGAAAAGGGGTTTTCTTTGAGAAAAAATTTGCACTCCTTCTATGATTCTTGTAACAAAAAAATGGACATTGTGCAATATGTCTGTTATGTTTGTAACAAGCATGGTTTCAAGCATGGGATTCGGGCGGATCCTAAGAACAAGACAAACTCGGATACTCTTGTTCTCATTGAATATCATAAAGAGAAAGAACTTCCCGAGGAAAGGACCGGTTGCCCAGCTAGTATTTCGTTGAAGTATGATTCTAATGTTAAAGGTTATCACATATACAAATGGAATGTTACTCATAACCACCCTCTCCATAAACCCGAGCATTTGCATTACTTGAGATCGGCTCGAGAGATTAGTGAGCCTCAAAAACAACTTGCTATAATAAATTCGAAATCAGGCATGTCTGTAAGATCCTCCTTTCATGTTATGCGTCAAATAGCTGGTGGTTCAAAGAACCTTGGGTATTGCTTCCAAGATTTAAAGAACTTTCTCACCACTGTTCGACAAAAGGAAATGGTCATTGGTGATGCAACTATTATCCAAGAATATCTTAGAAATGAAGCTTTGAGGAACCCATCGTTCTATTATGATATCCAAGTAGATTGTGAAGAGAACATAGCTAGCATTTTCTGGTCAGATGCAATCATGCAGCAAGACTATGAATTATTTGGTGATCTCATCAGTTTCGACACAACTTATTGA 825 0.377 MDEISSSTNVTQDVGSISGENKESWQHFVFHDLSSIKDFYAKYAHEKGFSLRKNLHSFYDSCNKKMDIVQYVCYVCNKHGFKHGIRADPKNKTNSDTLVLIEYHKEKELPEERTGCPASISLKYDSNVKGYHIYKWNVTHNHPLHKPEHLHYLRSAREISEPQKQLAIINSKSGMSVRSSFHVMRQIAGGSKNLGYCFQDLKNFLTTVRQKEMVIGDATIIQEYLRNEALRNPSFYYDIQVDCEENIASIFWSDAIMQQDYELFGDLISFDTTY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04086 274 PANTHER OS01G0519700 PROTEIN 22 269 - -
Vivi4g04086 274 Pfam FAR1 DNA-binding domain 38 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04086 Vivi-Chr4 165402911 165403735 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi4g04086 FAR1 1.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04086 - - vvo:131652168 530.02