Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04072 ATGGTTTCTTCTTCTTCTTCTTCTTCGGCTTTGTTTCTCGGTCTTATGTTTCTGTTGACACCATTGTTGCTCCTTTCATCCTCATCTCAACCACTAGAGTTTCACGTTGGGGGTAAAGATGGTTGGGATCTCAAACCTTTTGATTACTACAATAGTTGGGCCCAGAGAAACAGGTTTCAAGTCAATGACACTCTCAATTTCAAGTACAATAAAAAAAGTGATTCAGTTCTTGTGGTGAAGAAGGAAGACTATGATTCCTGCAACATCAACCATCCAAAACAAAAGATGGACGACGGAGATTCGAGATTCAAGCTCGGTGATTCGGGTCTGTATTTTTTCATCACTGGCAATATTGATCATTGTAAACAAGGGCAAAAGATTATTGTTTTAGTCATGGAAGTTAGACATCGTAACCCTCCTCCTACCGTGGTTGCAGCCCCGTCTCCCGTAAGTGGCTTGTCGCCACCTCTGATTCACAAGTCCGCTTTGGATGCTTCGCCCCCGTCTCAGTCGAAAGCAAGTTCGGTGGGTTTTGGTGTTGTGGTTTGGGTTGGTTTGATATACAATTCTACTGCTGCGACTGACAAAACAGTCTCTACTATTGAAAAACCTGTACAGAAGACACCACCAGTTTCATCTGTAGTGATGTCGTCCAAAAGTTTTACCGCAGACGGTAAACTTTGTACTGCTGATGGTTCTATAGTTGCTAAGAAGGTTGACACACCAACTTCAATAACTTCATCTATTGCTACTGATCCTACTATTAAGCCAAAAACAGAGGAACATAGCAAAGAATAA 798 0.4198 MVSSSSSSSALFLGLMFLLTPLLLLSSSSQPLEFHVGGKDGWDLKPFDYYNSWAQRNRFQVNDTLNFKYNKKSDSVLVVKKEDYDSCNINHPKQKMDDGDSRFKLGDSGLYFFITGNIDHCKQGQKIIVLVMEVRHRNPPPTVVAAPSPVSGLSPPLIHKSALDASPPSQSKASSVGFGVVVWVGLIYNSTAATDKTVSTIEKPVQKTPPVSSVVMSSKSFTADGKLCTADGSIVAKKVDTPTSITSSIATDPTIKPKTEEHSKE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04072 265 PANTHER BLUE COPPER PROTEIN 33 170 IPR039391 GO:0009055
Vivi4g04072 265 ProSiteProfiles Phytocyanin domain profile. 32 133 IPR003245 GO:0009055
Vivi4g04072 265 Gene3D - 32 136 IPR008972 -
Vivi4g04072 265 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Vivi4g04072 265 SUPERFAMILY Cupredoxins 32 132 IPR008972 -
Vivi4g04072 265 CDD OsENODL1_like 33 132 IPR041846 -
Vivi4g04072 265 FunFam Early nodulin-like protein 1 31 136 - -
Vivi4g04072 265 MobiDBLite consensus disorder prediction 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04072 Vivi-Chr4 165216107 165217142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04072 13 187 Phytocyanin Superfamily AT4G28365 43.085 8.26e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04072 - - vvo:131598244 471.47