Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04018 ATGGCCCAATCTCTGGTATTCTCGGTGAAAAGGCGTGCACCTGAACTTATAACTCCTGCAAAACCAACACCTCATGAAATCAAATTACTTTCGGACATTGATGACCAAGATGGTTTACGTTTACAAATTCCAGTTATACAATTTTACAGCTATGATCCAAATATGATAGGGAAAGACCCTGTTGAAGTTATTCGAAAAGCATTGGCAAAAACACTTGTGTTTTACTATCCATTTGCAGGCAGATTGAGGGAAGGTCCCGGTAGGAAACTTATGGTTGACTGTAATGAAGAAGGTGTATTGTTCATTGAAGCTGATGCTGATGTTACTCTGAAAGATTTTGGTGATGCTCTTCATCCTCCATTTCCTTTATTGAATGAGCTTCTTTATGATGTTCCTGGTTCTTCAGATTTGCTTAATACTCCACTGCTTCTTGTTCAGGTAACACGTCTAAAGTGTGGTGGTTTCATTTTCGCGCTTCGTTTAAACCATACAATGAGTGACGCTCCAGGTTTAGTTCAATTCATGAGCGCCTTAGGAGAAACAACTCGCGGAATGGAAAAACCTTCAATCTCCCCAGTATGGTGCAGAGAGCTTCTAAATGCAAGGGATCCACCAAGAGTGACGTGCACTCATCGTGAATATGAAAGAGCGCCCGACAAAAAAGAAACCCTCATTCCCTTTGATGACATGGTTCACCACACTTTCTTCTTTGGTCCTACTGAGGTAGCTGCAATTCGCTCTCTTCTTCCACCTTGCCAACGACAACAATACTCGAATTTTGAAATCATCGCTGCTTACTTTTGGCGCTGTCGTACTATAGCATTACAACTAAATCCTAATGAAGAGGTTCGTATAATCTGCATTGTCAATGCACGGAGCAAACATGTAAACCTACTGCTACCAAATGGTTACTATGGTAACGCTCTAGCGAAACCTGCTGCAGTTACAACTGCAGGAAAACTAACTGAAAACCCTTTGGCGTATGCTTTGGATTTAGTTAAGAAGGCAAAAGCTAATGTCACACAAGAGTATATGCATTCAACTGCGGACTTAATGGTCATCAAGGGTCGACCTGGTTATACAGTGGAGGGATTGTATCTAGTTACTGATGTGACACGTGCTGGATTTAGAGAGGTTGATTTTGGTTGGGGGAAAGCTGTTTATGGAGGACCGGCTAGAACAGGAGATGGTGGTATTGCTGGCTTTCATATACCTTTCAAAAATGCTAAAGGGGAGGATGGTTTGATTATACCATTTTTTCTCCCATCTCATGCCATGGAGAGGTTGATAAAAGAGACCGATAATTTACTTAAGAGAAACATTAACCAGCCTACTAAGAATAATCCAAAATCTGGTATCACTATTTCTTCATTGTAG 1377 0.411 MAQSLVFSVKRRAPELITPAKPTPHEIKLLSDIDDQDGLRLQIPVIQFYSYDPNMIGKDPVEVIRKALAKTLVFYYPFAGRLREGPGRKLMVDCNEEGVLFIEADADVTLKDFGDALHPPFPLLNELLYDVPGSSDLLNTPLLLVQVTRLKCGGFIFALRLNHTMSDAPGLVQFMSALGETTRGMEKPSISPVWCRELLNARDPPRVTCTHREYERAPDKKETLIPFDDMVHHTFFFGPTEVAAIRSLLPPCQRQQYSNFEIIAAYFWRCRTIALQLNPNEEVRIICIVNARSKHVNLLLPNGYYGNALAKPAAVTTAGKLTENPLAYALDLVKKAKANVTQEYMHSTADLMVIKGRPGYTVEGLYLVTDVTRAGFREVDFGWGKAVYGGPARTGDGGIAGFHIPFKNAKGEDGLIIPFFLPSHAMERLIKETDNLLKRNINQPTKNNPKSGITISSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04018 458 PANTHER ACYL TRANSFERASE 4 7 436 - -
Vivi4g04018 458 Gene3D - 212 432 IPR023213 -
Vivi4g04018 458 Pfam Transferase family 8 433 - -
Vivi4g04018 458 Gene3D - 8 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04018 Vivi-Chr4 161134800 161136256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04018 9 392 Monolignol Biosynthesis Gene Families AT5G48930 29.293 1.64e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04018 K19861 - gmx:100797017 659.833