Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04011 ATGTTTTTGAAGGATAATAACACTAACAACACTAACGGCTACCACCATCAACAACCACCACCTCCACCACCAGAAATGGTGCATAATCACAGCAACAGAGATAGAGCCCGTCACGGCACTCGCCGCTCACGTGTTTCCACTTCTAATTCCCGTGTTAGGGTTTCCGATGCCGAACAACCTCAACAGCCTACTAATCGATCTCCTTGCACCGATTACGACATGGCGTATTTTCATTCCTATGCTCATCTCGGTATTCATCAAGAAATGATCAAGGATCGCGTGCGGACTGATACTTATAGGGAAGCAATCATGCGGCATCAGAGTCTTATTGCTGGCAAAGTCGTAGTTGATGTTGGTTGCGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCAGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTAACATTGCTCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTGTCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGGAGCGTTATTACTGCCAGAGATCGCTGGCTCAAACCCGGTGGTCTTATTCTTCCTTCGAGTGCATCGTTGTACATGGCTCCTGTCACACATACGGACAGATACAGTGACAGCGTCGACTTTTGGCGCAATGTTTATGGAATTGACATGTCTGCCATGTTATCTTTAGCAAAACAATGTGCCTTTGAGGAACCTTCTGTGGAGACAATAACCGGTGAAAATATTTTGACATGGCCACATATGGTTAAATATATTGATAGCTATTCCGTTACCATTAATGAGTTAGAAACTGTAACATCGAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTCAATGTGCCTAAGGTAGAGTCATCAACATCAGTTATCGAGAATAATCAACTGAACGGTAGTTTGAGGAAAAAGCGAACAAATCCTAGTGAAGCACTGGTCCTATCCACTGCACCCGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTCTATGATCCTATTGACCTGGAACAAGATCAATTAATCGAAGGTTTAGTAACATTGACACAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATAATTCGGGTAATCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1260 0.4238 MFLKDNNTNNTNGYHHQQPPPPPPEMVHNHSNRDRARHGTRRSRVSTSNSRVRVSDAEQPQQPTNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTDTYREAIMRHQSLIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASNIALQANEVVKANNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSASLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHMVKYIDSYSVTINELETVTSKFKFNSMMRAPLHGFAFWFDVEFNVPKVESSTSVIENNQLNGSLRKKRTNPSEALVLSTAPEDPPTHWQQTLIYFYDPIDLEQDQLIEGLVTLTQSKENARFMNIHLEYNSGNRSYVKESVMR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04011 419 MobiDBLite consensus disorder prediction 1 15 - -
Vivi4g04011 419 Gene3D Vaccinia Virus protein VP39 70 215 IPR029063 -
Vivi4g04011 419 Gene3D - 217 418 - -
Vivi4g04011 419 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 38 408 IPR025799 GO:0016274|GO:0018216
Vivi4g04011 419 FunFam Protein arginine N-methyltransferase 6 217 417 - -
Vivi4g04011 419 CDD AdoMet_MTases 115 214 - -
Vivi4g04011 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 409 IPR029063 -
Vivi4g04011 419 MobiDBLite consensus disorder prediction 1 70 - -
Vivi4g04011 419 Pfam Ribosomal protein L11 methyltransferase (PrmA) 111 185 - -
Vivi4g04011 419 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 73 402 IPR025799 GO:0016274|GO:0018216
Vivi4g04011 419 MobiDBLite consensus disorder prediction 45 69 - -
Vivi4g04011 419 FunFam Protein arginine N-methyltransferase 6 69 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04011 Vivi-Chr4 161033549 161043850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04011 76 385 C2H2 Transcription Factor Family AT3G12270 39.385 1.37e-66 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04011 K11437 - gmx:100809174 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04011 4 161033549 161043850 Vivi4g04011 4 161033549 161043850 ECH