Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03992 ATGAGTAAAATGGTTTCTAGCTTGATTTTGATATTTCTATCAATATCTTCACTGGCTTCAGCATCTCTCCAGGTTGGATTCTATGGCTACACATGTCCATCTGCTGAGACAATAGTGAGAAATACGGTTAACAAAGCTGTTTCACAAAGCCCTGGCTTAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTTAGGGGTTGTGATGCTTCTGTGTTACTAGCATCAACACCAGGAAACATAGCTGAGAGAGACAACTTCGTCAACAATCCAAGCCTACGCGGCTTCGAGTTTATCAACGAGATCAAGGCCCAACTAGAATCGGAATGTCCGCAGACAGTATCGTGTGCGGACATTCTTACCTTTGCAGCAAGAGACAGTGCTCTCAAGCTCAGTGGTGGTACTATAAACTACGAGGTACCATCAGGGCGAAGAGACGGCCGTGTCTCTATCGGAGACGAAGTGCCAAAAAATCTACCCGCACCTTTCTTCACCACCGATCAACTCATCGCAAACTTTGCACAGAAAGGGTTATCCGCCGATGAAATGGTTACACTCTCGGGAGCACATTCAGTTGGTGTATCACACTGTTCTTCTTTCTCGAACCGTTTGTATTCATTTAGTAATACAAACGCTGTGGATCCTTCCATGGATCCATCATTCGTTGAATCATTGAAAACAAAGTGTCCAGTTCCACCAAGTAGCAACGATCCATTAGTGGTGCTTGATGTTGGTAGTCCTAATCGTTTGGATAGTGTTTACTATGAAGGATTGGTTAACCATCGTGGTTTGTTGACTTCCGATCAAACGTTGTTGAGTAGTGAATCAACAAAAGAAATTGTGGTAAATAATGCAAATTATGGTGCAAATTGGGCTAAGAAGTTTGCAGATGCTATGGTGCATATGGGTTCTATTGATGTGGTAAGTGGCTATGATGGTGAGATTAGGAAACATTGCAACTTTGTCAATTAA 978 0.4254 MSKMVSSLILIFLSISSLASASLQVGFYGYTCPSAETIVRNTVNKAVSQSPGLGAGLIRMHFHDCFVRGCDASVLLASTPGNIAERDNFVNNPSLRGFEFINEIKAQLESECPQTVSCADILTFAARDSALKLSGGTINYEVPSGRRDGRVSIGDEVPKNLPAPFFTTDQLIANFAQKGLSADEMVTLSGAHSVGVSHCSSFSNRLYSFSNTNAVDPSMDPSFVESLKTKCPVPPSSNDPLVVLDVGSPNRLDSVYYEGLVNHRGLLTSDQTLLSSESTKEIVVNNANYGANWAKKFADAMVHMGSIDVVSGYDGEIRKHCNFVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03992 325 PANTHER PEROXIDASE 25-RELATED 13 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 ProSiteProfiles Plant heme peroxidase family profile. 22 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 Pfam Peroxidase 39 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 Gene3D Peroxidase, domain 2 162 304 - -
Vivi4g03992 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 FunFam Peroxidase 26 170 - -
Vivi4g03992 325 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Vivi4g03992 325 FunFam Peroxidase 162 304 - -
Vivi4g03992 325 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 Gene3D - 26 325 - -
Vivi4g03992 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vivi4g03992 325 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Vivi4g03992 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g03992 325 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03992 Vivi-Chr4 160777904 160779396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03992 8 325 Peroxidase AT4G11290 43.887 1.31e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03992 K00430 - gmx:100786791 461.84