Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03991 ATGTGCCTTCTTCCTGTCTCCACCACTTCCTGTTTCCAAACTCAATCATTACATTACATTACTCACTCCCTCCTCCTCCTTCCTCCTCCTCTAAACAAACCAAAAAAACCCAAAACCCTCCTTCACAATATTAAATTAAAAAAAAACAACATGTCTAACTCCAAGGAAACATCTAACGCCGTCACAACAACAGACCCCGAACCCACAAACCAACCCGCCACTAAAAAACCACCGTCAAAAGACCGTCACAGCAAAGTCGACGGACGCGGCAGAAGAATACGCATGCCAATCATCTGCGCCGCACGTGTCTTCCAGCTGACACGTGAGCTCGGCCATAAATCCGACGGTCAAACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACCGGGACCGGAACTACTCCCGCTTCTTTCTCTTCTCTCTCCGAGCATAAACCGTTTCTCTCTCCTTCTCCGTTTATTCTCGGGAAACGGTTACGTTCGGAACATGATGAAGCGGTTTCTGTTTCGATTGCGGCTCCTACTGCTCCTCCTGCTTTGTGGAGGCCGGATTTCGCTCAGCTTTGGAGTTTCGCTGCTGCTCAGCCTCCGCCGGATGTTCTTTCCATTTCGCCGAATCAGCATCATCATCAGCATAGTTCGCTGTTTCATCATCAACAGCAGCAGCAACAGCAACAACAGCAGCATCAACAACAAGGTTCCATGGGAGAAGCTTCCGCGGCGAGGCTAGGGAATTATCTCCCCGGACATCTGAATTTGCTCGCTTCATTGTCCGGTGGTAATGGAAACTCCGGCCGCGGAGACGACGAGGATCGTTGA 834 0.5108 MCLLPVSTTSCFQTQSLHYITHSLLLLPPPLNKPKKPKTLLHNIKLKKNNMSNSKETSNAVTTTDPEPTNQPATKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFLSPSPFILGKRLRSEHDEAVSVSIAAPTAPPALWRPDFAQLWSFAAAQPPPDVLSISPNQHHHQHSSLFHHQQQQQQQQQQHQQQGSMGEASAARLGNYLPGHLNLLASLSGGNGNSGRGDDEDR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03991 277 MobiDBLite consensus disorder prediction 44 89 - -
Vivi4g03991 277 Pfam TCP family transcription factor 79 237 IPR017887 -
Vivi4g03991 277 MobiDBLite consensus disorder prediction 205 243 - -
Vivi4g03991 277 MobiDBLite consensus disorder prediction 204 277 - -
Vivi4g03991 277 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Vivi4g03991 277 MobiDBLite consensus disorder prediction 45 70 - -
Vivi4g03991 277 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 66 227 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03991 Vivi-Chr4 160769747 160771484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03991 73 277 TCP Transcription Factor Family AT5G23280 59.740 6.91e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi4g03991 TCP 6.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03991 K16221 - gmx:100795254 245.743