Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03985 ATGTTGTTTAATTTCCATGAACTATGGAAGCCAGTGATGGTTATGATTATAGTGAATTTAGCTTTATCCATTGTCAATGTATTTTTGAAGAAAATTCTTAATGGAGGAATGGACCATTTAACCATTTTAACATATAGACAAGCAATTGCATCCATTTTCTTAGCACCTATTGCTTGCATCTTTGAAAGGGAAAGCAAGATTGATGGCCATACAATATGTCTCCTTTTCTTTAGTGCTCTTGTAGGAGTAACACTCACACAATATCTCTATCTTGTGGGACTTGAATATACATCAGCAACCTTCTCATGTGCATTTCTCAATACAGTGCCTGTATTCACATTTATTATGGCTCTCCCTTTCGGGATGGAGAAAGTGAGCATGAAAAGCAAGAGTGGTAAAGCCAAAGTCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGTTATTGATCCTTTACAAAGGAATGCCCTTAATCAACCCACAATCTCATCCTGTAGCTAACAAAGTCACAATACCAGCATCAGCCTCCAGTTTAAAGAAATGGATTATAGGTTCAATATTTCTGATTGCATGTTGCCTCTTCTGGTCTTCATGGTTTCTTATACAAGAAAGGGTTGGCAAAAAGTATCCATATCAATATTCTAGCACAGCCATTTTGTCATTCTTTGCTGCCATTCAATCCGCAATATTAAACTTGATCATCCATAGAAACAATGCCAAATGGATTCTCAAAGGAAAGCTACAGATAATGACTATTATATATTCGGGGTTGGTGGGATCAGGATTATGCTATGTGGCAATGGCATGGTGTGTCAAACAAAAGGGTCCAGTATTCACTGCAGCATTTACCCCACTTTTACAGATGTTTGTAGCTGTGCTTGATCTATGTATATTACAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTCATTTCTGGCATGTATATGCTCTTATGGGGTAAAAGTAAAGAGAGAGAACAGTGTGGCTTGAAGGACATTCAAGAAAGTCAAAAGGATGAAGAATGTCACTAA 1041 0.3737 MLFNFHELWKPVMVMIIVNLALSIVNVFLKKILNGGMDHLTILTYRQAIASIFLAPIACIFERESKIDGHTICLLFFSALVGVTLTQYLYLVGLEYTSATFSCAFLNTVPVFTFIMALPFGMEKVSMKSKSGKAKVLGTFVCIGGALLLILYKGMPLINPQSHPVANKVTIPASASSLKKWIIGSIFLIACCLFWSSWFLIQERVGKKYPYQYSSTAILSFFAAIQSAILNLIIHRNNAKWILKGKLQIMTIIYSGLVGSGLCYVAMAWCVKQKGPVFTAAFTPLLQMFVAVLDLCILQEEIYLGSVVGSVLVISGMYMLLWGKSKEREQCGLKDIQESQKDEECH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03985 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Vivi4g03985 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Vivi4g03985 346 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Vivi4g03985 346 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Vivi4g03985 346 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03985 Vivi-Chr4 160661729 160664941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03985 7 255 Nodulin-like Gene Family AT3G30340 45.817 4.02e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03985 - - gmx:100794199 535.798