Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03971 ATGAAGAAACTTTCTTTCTCCTTCCCTTCTTCAAAATCTTCATCCAAGTCAAACAATTCCGTCAAACCCTCCCAAACCTTCGGCGAAGATTCTTCCACCAATCCACAACATCTTCAAAAACACTTAATCACCGAATTCGACCCTTCCAATCTCCAAACCCTAGACCCAAATCCCAAAACCCTAATTCCCCCAATTCAAAACCAATGGCGTCCCTACAAAAAGATGAAGAATCTCGATCTTCCCTTAACCGATTCGCACTCCTCCCATTCCCTCACTTTCGAACCGGATACCACTTCGATCTCCGATCAAGCTGAATCTGACAAGTCATCTTACGGGCTTAATCTCCGTTCCGCGAATTCCGAAAACAAGTTACAGCAAGTTGACGGTGATGCTCCGCGGCTCCGGGTTCCGATTGAGGTTAACATGATGCAGAAGTTTAAGGAGGATATGGAGAGGCTTCCGGAAGATCAGGGGTTTGATGAGTTTAAGGATGTTTCGGTGGATGGTTTTGGTGCGGCGCTTTTGGGTGGGTATGGATGGAAAGAAGGAATGGGGATTGGGAAGAATGCTAAGGAGGATGTTAAAGTTGTTGAGGTTAAGAGGAGGACTGCTAAGGAAGGTTTGGGTTTTGTTGCGGATTTGCCTCCTCCTACTTCGAAGAAAGGCGAAAGGAATGGGAAGGTGGAGAGTGAGAAGAGGAAGAAGGAGGAGAAAGTTGTGAGAATTGTCCGAGGTAGAGATGTTGGATTGAAGGCTAGTGTTGTTGGTAGAATTGGGGATGATGTTCTTGTTTTGAAGGTTTCGGGGAGTAGTGAGGAAGTTAAGGTTAGGGTAGAAGATGTTGCTGAATTGGGTTCTGTTGAAGAAGATAGGTGTTTGAGAAAGTTGAAGGATTTGAACAAGGTTAAAGACCGTGAGGAGGAAAGAGGGTCTCGTAGTAAGCATCGGAGGGATGAGGTGAAAGAGAGGAGAGTGGATGGTAATCATGGTGGTAAGGAAGAGAAGGGGAAGAAACAGGTTCCTTGGCTTACAAGTCACATTCGGGTTAGGGTGGTTAGTCGAAGTTTTAAAGGGGGGAGATTTTATTTGAAGAAGGGTGAGGTTTTGGATGTTATTGGACCTACTACTTGTGACATATCTATGGATGAGAGTAGGGAGATTATTCAAGGGGTGTCTCAAGATATGCTTGAGACGGCTATTCCTCGACGAGGGGGGCCTGTTCTTGTATTGCATGGGAAACATAAGGGTGCCTTTGGGAGTCTTGTTGAGAGGGATTTGGATAGGGAGATTGGTATTGTTAGGGATGCTGATACCCATCAGATGCTCAATGTCAAACTTGAACATATGGCAGAGTATATAGGGGACCCAAGCTTATTGGGACATTGA 1386 0.4538 MKKLSFSFPSSKSSSKSNNSVKPSQTFGEDSSTNPQHLQKHLITEFDPSNLQTLDPNPKTLIPPIQNQWRPYKKMKNLDLPLTDSHSSHSLTFEPDTTSISDQAESDKSSYGLNLRSANSENKLQQVDGDAPRLRVPIEVNMMQKFKEDMERLPEDQGFDEFKDVSVDGFGAALLGGYGWKEGMGIGKNAKEDVKVVEVKRRTAKEGLGFVADLPPPTSKKGERNGKVESEKRKKEEKVVRIVRGRDVGLKASVVGRIGDDVLVLKVSGSSEEVKVRVEDVAELGSVEEDRCLRKLKDLNKVKDREEERGSRSKHRRDEVKERRVDGNHGGKEEKGKKQVPWLTSHIRVRVVSRSFKGGRFYLKKGEVLDVIGPTTCDISMDESREIIQGVSQDMLETAIPRRGGPVLVLHGKHKGAFGSLVERDLDREIGIVRDADTHQMLNVKLEHMAEYIGDPSLLGH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03971 461 PANTHER G PATCH AND KOW-CONTAINING 1 457 IPR045166 GO:0000398
Vivi4g03971 461 MobiDBLite consensus disorder prediction 220 235 - -
Vivi4g03971 461 MobiDBLite consensus disorder prediction 303 339 - -
Vivi4g03971 461 MobiDBLite consensus disorder prediction 1 64 - -
Vivi4g03971 461 MobiDBLite consensus disorder prediction 209 235 - -
Vivi4g03971 461 SMART G-patch_5 165 211 IPR000467 GO:0003676
Vivi4g03971 461 ProSiteProfiles G-patch domain profile. 167 213 IPR000467 GO:0003676
Vivi4g03971 461 SMART kow_9 233 260 IPR005824 -
Vivi4g03971 461 SMART kow_9 400 427 IPR005824 -
Vivi4g03971 461 MobiDBLite consensus disorder prediction 1 68 - -
Vivi4g03971 461 Coils Coil 289 309 - -
Vivi4g03971 461 MobiDBLite consensus disorder prediction 85 109 - -
Vivi4g03971 461 Pfam G-patch domain 154 211 IPR026822 -
Vivi4g03971 461 Gene3D - 346 400 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03971 342 428 C2H2 Transcription Factor Family AT1G55460 32.184 1.37e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03971 K13101 - gmx:100784983 498.434